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@Kapoorlabs-CAPED

caped-ai

Content Aware Prediction and Detection using Artificial Intelligence

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  1. VollSeg VollSeg Public

    Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Available via pip package vollseg.

    Python 29 5

  2. NapaTrackMater NapaTrackMater Public

    Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.

    Python 16 4

  3. vollseg-napari vollseg-napari Public

    Napari plugin for vollseg

    Python 12 1

  4. vollseg-napari-mtrack vollseg-napari-mtrack Public

    HTML 2

  5. vollseg-napari-trackmate vollseg-napari-trackmate Public

    Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library

    Jupyter Notebook

  6. cookiecutter-kapoorlabs-napari-plugin cookiecutter-kapoorlabs-napari-plugin Public

    Cookiecutter template for generating KapoorLabs written Napari plugins.

    Python

Repositories

Showing 10 of 41 repositories
  • NapaTrackMater Public

    Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.

    Python 16 BSD-3-Clause 4 0 0 Updated Apr 27, 2024
  • vollseg-napari-trackmate Public

    Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library

    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Apr 27, 2024
  • caped-ai-tabulour Public
    Python 0 BSD-3-Clause 0 0 0 Updated Apr 27, 2024
  • caped-ai-metrics Public

    Metrics for instance segmentation and static and action classification. Available via pip package caped-ai-metrics.

    Python 0 MIT 1 0 0 Updated Apr 22, 2024
  • nellie-actin-tubules Public Forked from aelefebv/nellie

    Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

    Python 0 2 0 0 Updated Apr 18, 2024
  • caped-ai-oneat Public

    oneat = Open Network for Event as Action Topologies. Available via pip package oneat

    Python 5 BSD-3-Clause 0 0 0 Updated Mar 21, 2024
  • KapoorLabs-Lightning Public
    Python 1 BSD-3-Clause 0 0 0 Updated Feb 23, 2024
  • VNet Public

    Visualize activations of any neural network in Napari

    Python 0 BSD-3-Clause 0 0 0 Updated Dec 9, 2023
  • VollSeg Public

    Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Available via pip package vollseg.

    Python 29 BSD-3-Clause 5 0 0 Updated Oct 28, 2023
  • vollseg-napari-mtrack Public
    HTML 2 BSD-3-Clause 0 0 0 Updated Oct 28, 2023
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