SeqData is a Python package for loading genomics sequenced-based data from a variety of file formats into xarray objects. SeqData provides a unified interface for loading data from:
- TSV -- tabular data
- FASTA -- sequence data
- BED -- genomic intervals
- BAM -- sequence alignments
- BigWig -- continuous genomic data
- VCF -- genomic variants
SeqData is designed to be used via its Python API.
- {doc}
Install SeqData <installation> - Browse the main {doc}
API <api>
SeqData is an open-source project and we welcome contributions from the community.
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