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<h1>Read in reference dataset</h1>
<small class="dont-index">Source: <a href='https://github.com/mrcieu/gwasglue/blob/master/R/harmonise.r'><code>R/harmonise.r</code></a></small>
<div class="hidden name"><code>read_reference.Rd</code></div>
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<div class="ref-description">
<p>Read in reference dataset</p>
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<pre class="usage"><span class='fu'>read_reference</span><span class='op'>(</span>
<span class='va'>reference_file</span>,
rsid <span class='op'>=</span> <span class='cn'>NULL</span>,
chrompos <span class='op'>=</span> <span class='cn'>NULL</span>,
remove_dup_rsids <span class='op'>=</span> <span class='cn'>TRUE</span>
<span class='op'>)</span></pre>
<h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
<table class="ref-arguments">
<colgroup><col class="name" /><col class="desc" /></colgroup>
<tr>
<th>reference_file</th>
<td><p>Reference vcf</p></td>
</tr>
<tr>
<th>rsid</th>
<td><p>List of variants to read</p></td>
</tr>
<tr>
<th>chrompos</th>
<td><p>List of chrompos to read</p></td>
</tr>
<tr>
<th>remove_dup_rsids</th>
<td><p>=TRUE Remove duplicates from output</p></td>
</tr>
</table>
<h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
<p>data frame</p>
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