Tools for visualising amplicon data
ampvis2 is an R-package to conveniently visualise and analyse 16S rRNA amplicon data in different ways.
Blog posts about ampvis2
Check out the blog posts at http://albertsenlab.org/ about selected ampvis2 plotting functions. The posts include details as well as example code:
- ampvis2: The bread and butter of our amplicon analyses: amp_heatmap!
- ampvis2: A guide to ordination and how to use amp_ordinate in R
- Analysing amplicon data, how easy does it get?
An interactive Shiny app with some of the basic functionality of ampvis2 can be found at: https://kasperskytte.shinyapps.io/shinyampvis
To install a specific (older) release of ampvis2 use
"@release" as suffix, fx
remotes::install_github("firstname.lastname@example.org") to install the first release (2.0) of ampvis2. The latest stable release can be installed with