Simple:
pip install git+https://github.com/MatteoLacki/waters
Devel:
git clone https://github.com/MatteoLacki/waters
cd waters
pip install -e .
On Windows, add PYTHONPATH to PATH to run scripts. It makes sense to add '.py' to PATHEXT system variable (to run scripts without specifying the interpreter).
After first installation, run
create_waters_shortcuts.py
as this will create executables for SendTo explorer tool.
From terminal, you can call this to translate things to csvs.
usage: iadbs2csv.py [-h] paths [paths ...]
Get information on iaDBs.
positional arguments:
paths Paths to outputs of the iaDBs. If
directly. If supplied folders, th
files ending with '_IA_workflow.x
optional arguments:
-h, --help show this help message and exit
From terminal, you can call this to get stats on IA_workflow.
usage: iadbs2stats.py [-h] iadbsxml [iadbsxml ...]
Get information on iaDBs.
positional arguments:
iadbsxml Paths to outputs of the iaDBs. If ending with '.xml',
directly. If supplied folders, these will be searched
files ending with '_IA_workflow.xml'.
optional arguments:
-h, --help show this help message and exit