Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Installing 0.1.26 with Anaconda #54

Open
danudwary opened this issue Apr 10, 2021 · 2 comments
Open

Installing 0.1.26 with Anaconda #54

danudwary opened this issue Apr 10, 2021 · 2 comments

Comments

@danudwary
Copy link

I'm getting a failure to install deepbgc 0.1.26 using Anaconda. Fails with no available version of matplotlib-base==2.2.3

Is that version really a hard requirement?

`------

[9/9] RUN conda create -n dbgcenv -c bioconda -y deepbgc=0.1.26:
#13 0.684 Collecting package metadata (current_repodata.json): ...working... done
#13 3.771 Solving environment: ...working... failed with repodata from current_repodata.json, will retry with next repodata source.
#13 4.193 Collecting package metadata (repodata.json): ...working... done
#13 14.16 Solving environment: ...working...
#13 23.31 Found conflicts! Looking for incompatible packages.
#13 23.31 This can take several minutes. Press CTRL-C to abort.
#13 23.31 failed
#13 23.31
#13 23.31 PackagesNotFoundError: The following packages are not available from current channels:
#13 23.31
#13 23.31 - matplotlib-base==2.2.3
#13 23.31
#13 23.31 Current channels:
#13 23.31
#13 23.31 - https://conda.anaconda.org/bioconda/linux-64
#13 23.31 - https://conda.anaconda.org/bioconda/noarch
#13 23.31 - https://repo.anaconda.com/pkgs/main/linux-64
#13 23.31 - https://repo.anaconda.com/pkgs/main/noarch
#13 23.31 - https://repo.anaconda.com/pkgs/r/linux-64
#13 23.31 - https://repo.anaconda.com/pkgs/r/noarch
#13 23.31
#13 23.31 To search for alternate channels that may provide the conda package you're
#13 23.31 looking for, navigate to
#13 23.31
#13 23.31 https://anaconda.org
#13 23.31
#13 23.31 and use the search bar at the top of the page.
`

@prihoda
Copy link
Collaborator

prihoda commented Apr 11, 2021

It looks like it didn't search in conda-forge, can you add that channel? It's a common one to have in your channels list alongside bioconda and main, a lot of packages are not available on the other default channels.

conda config --add channels conda-forge

@danudwary
Copy link
Author

Ah! Perfect, thanks!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants