MotrpacBicQC v0.7.5

• Update write_proteomics according to the latest updates on data/file structure
• Fix bugs

MotrpacBicQC v0.7.4

• Metabolomics plots: check if enough compounds to generate plots
• Update assay_codes: conventional assays code added (CONV)

MotrpacBicQC v0.7.3

• Improvements of write release functions

MotrpacBicQC v0.7.2

Update package dependency

MotrpacBicQC v0.7.1

Updates affecting the proteomics validation:

• validate_proteomics: rename argument run_by_bic to check_only_results. Default is still FALSE (it does not affect CAS)
• Adjust size of pdf output depending on the number of samples
• Support BICRESULTS_YYYYMMDD folder validation (similar to the currently supported RESULTS_YYYYMMDD and PROCESSED_YYYYMMDD folders). This folder is the output of the proteomics pipeline run by the BIC

MotrpacBicQC v0.7.0

Update MoTrPAC color abbreviations

MotrpacBicQC v0.6.9

• Metabolomics: new density plots
• Code optimizations
• Bug fixes affecting file manifest checks

MotrpacBicQC v0.6.8

Refactor the DMAQC validation. A new file will be required when:

• Two phases are combined in the same batch (e.g., PASS1A-06|PASS1C-06)
• The phase content is different from the input folder name (e.g., PASS1C-06 might be submitted but the input folder name is PASS1A-06)

MotrpacBicQC v0.6.7

• DMAQC validation: print out missing vial labels
• Metabolomics QC: add mz/rt density plots

MotrpacBicQC v0.6.6

• Improve reporting and handling of required files when missed
• Fix minor bugs