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Adjusting FS (Sampling Frequency) from GUI #30

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alex-attinger opened this issue Mar 14, 2019 · 2 comments · Fixed by #595
Closed

Adjusting FS (Sampling Frequency) from GUI #30

alex-attinger opened this issue Mar 14, 2019 · 2 comments · Fixed by #595
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@nsteinme

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@alex-attinger
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Thanks a lot for this great tool. It worked 'out of the box' for us for Neuropixel data. However we encountered the following issue when using it with a different probe with different sampling rate.
When running the Kilosort2 from the GUI, it looks like it always uses the default sampling frequency (30'000), at least the field rez.ops.fs is set to 30000, even when in the GUI, a different sampling rate is set. It seems to work when starting kilosort via the master_kilosort.m and adjusting the ops.fs parameter in the config file.
@dimokaramanlis
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I had the same issue, so I ended up only using the master file.

@aliddell aliddell mentioned this issue Mar 21, 2019
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@marius10p
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Issue has become inactive. Closing.

@SEONGGAP SEONGGAP mentioned this issue Dec 13, 2021
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@carsen-stringer carsen-stringer mentioned this issue Feb 29, 2024
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@nsteinme nsteinme

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adding rtd and badges MouseLand/Kilosort
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@dimokaramanlis @alex-attinger @marius10p @nsteinme