The installation for requires Python 3.7 or greater.
First clone the GitHub repository and then install,
git clone https://github.com/NCATS-Tangerine/kgx
cd kgx
python setup.py install
To build directly from source, first clone the GitHub repository,
git clone https://github.com/NCATS-Tangerine/kgx
cd kgx
Then install the necessary dependencies listed in requirements.txt
.
pip3 install -r requirements.txt
For convenience, make use of the venv
module in Python 3 to create a lightweight virtual environment:
python3 -m venv env
source env/bin/activate
pip install -r requirements.txt