Small molecule treats "Adult disease"

[TranslatorIssueCreator]

Type: Bug Report

URL: https://ui.test.transltr.io/results?l=Adult%20Disease&t=0&q=b4adfbe2-c0af-4d44-9791-8537865aaae3

ARS PK: b4adfbe2-c0af-4d44-9791-8537865aaae3

Steps to reproduce:

Useless, and "Adult disease" should likely be removed

Screenshots:

[dkoslicki]

#288

[gaurav]

"Adult disease" is UMLS:C0277562, which appears to be a high-level category for diseases affecting adults. I don't know if there's a good way to filter out these high-level unnecessary categories in bulk, but we could come up with a filter list for them. The next question would be where this list should be maintained (we're tracking this question at TranslatorSRI/NameResolution#63):

1. In Babel: UMLS:C0277562 should not be included in any cliques in Node Normalization or Name Resolution. This would prevent "adult disease" from showing up in autocomplete or in Translator results.
2. In Name Resolution: UMLS:C0277562 could be included in NodeNorm, but should not be included in NameRes' Solr index. "Adult disease" could still show up in Translator results, but won't show up in autocomplete.
3. In UI: calling NameRes will still return UMLS:C0277562, but the UI will filter it out when displaying autocomplete results.

Other "adult" diseases exist, but they appear to be explicitly adult forms of other diseases (e.g. "adult-onset Still disease", "Adult Alexander disease", "Recurrent Adult Hodgkin Lymphoma").

[gaurav]

These results look reasonable now. I think we can close this!

[dkoslicki]

Is it someone's job to close these? Or is it up to the person who opened it?

[gaurav]

I would like the original reporter to be the person to close this after confirming that this is no longer an issue. But in this case, there is no "adult disease" in MONDO, so as long as that filter applies, this should not be an issue. So I'll go ahead and close this. We can reopen if it reappears.