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Do batch correction before OnClass #16

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aopisco opened this issue Jan 17, 2020 · 0 comments

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aopisco commented Jan 17, 2020

In the current version we run OnClass without doing any batch correcting between the new data and the data used to build the pre-trained model.

While this might work in a couple of situations, the current approach is not general.

What needs to be done:

Update onclass_annotations.py to do batch correction
Allow the user to select from a couple of methods to perform batch correction

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