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Sequencing_Tech_2018_Papers.md

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Key:

  • Hi-C, chromosome conformation capture
  • ONT, Oxford Nanopore Technology
  • PacBio, Pacific Biosciences
    • SMRT, Single-Molecule Real-Time
    • CLR, Continuous Long Read
    • CCS, Circular Consensus Sequencing
    • Hi-Fi, High-Fidelity
  • 📚 Review/Opinion Article
  • 🧬 Study involves human genome(s)
  • 🦠 Prokaryotic genome(s)
  • 🌱 Plant genome(s)
  • 💉 Focused towards medical genetics
  • 🛠 Includes tool/software development

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2018

Title: 📚💉🧬 Single molecule real-time (SMRT) sequencing comes of age: applications and utilities for medical diagnostics

Description: A summary of how SMRT sequencing technology has evolved into PacBio's RS II and Sequel systems and its use for various types of genetics studies.

Title: 📚💉🧬 Single-Molecule Sequencing: Towards Clinical Applications

Description: A nice review on how PacBio and ONTs are being used for microbiology, pharmacogenomics, cancer studies, and so on.

Title: 🦠 NGS Technologies and their Application to the Study and Control of Bacterial Infection

Title: 🦠 Targeted Long-Read Sequencing of a Locus Under Long-Term Balancing Selection in Capsella

Title: 🦠 Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices

Platforms: Illumina MiSeq and ONT MinION

Title: High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes


Contribute by submitting pull requests, or posting suggestions as issues. Thank you.