LEMS_NML2_Ex9_FN.xml

<Lems>

    <!-- Example with FitzHugh-Nagumo model -->

    <!-- 
    
    
    
    
    Needs to be updated, see https://github.com/NeuroML/NeuroML2/issues/42
    
    
    
    -->


    <!-- Specify which component to run -->
    <Target component="sim1" />

    <!-- Include core NeuroML2 ComponentType definitions -->
    <Include file="Cells.xml" />
    <Include file="Networks.xml" />
    <Include file="Simulation.xml" />


    <!-- Main NeuroML2 content. Based on http://www.scholarpedia.org/article/FitzHugh-Nagumo_model -->

    <fitzHughNagumoCell id="fn1" I="0.8" />


    <network id="net1">
        <population id="fnPop1" component="fn1" size="1" />
    </network>

    <!-- End of NeuroML2 content -->


    <Simulation id="sim1" length="200s" step="0.01s" target="net1">

        <Display id="d1" title="Ex9: FitzHugh-Nagumo cell model in LEMS" timeScale="1s" xmin="0" xmax="200" ymin="-2.5" ymax="2.5">
            <Line id="V" quantity="fnPop1[0]/V" scale="1" color="#ee40FF" timeScale="1s" />
            <Line id="W" quantity="fnPop1[0]/W" scale="1" color="#BBA0AA" timeScale="1s" />
        </Display>
    
        <OutputFile id="of1" fileName="results/ex9.dat">
            <OutputColumn id="V" quantity="fnPop1[0]/V"/> 
            <OutputColumn id="W" quantity="fnPop1[0]/W"/> 
        </OutputFile> 

    </Simulation>


</Lems>