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This issue seems to be a full-text index/query bug.
What steps will reproduce the problem?
1. pathwaycommons.org
2. search (does not matter pathways or molecules) for Sir2 or SIR2
What is the expected output? What do you see instead?
SIR2 (yeast) must be in top hits; there must be some pathway hits too
Searching by SIR* - success!
Originally reported by user:
On Fri, Feb 15, 2013 at 12:53 PM, <tmwitten@vcu.edu> wrote:
We are working on yeast genes related to replicative lifespan extension (i.e.
Sir2). When we enter Sir2 into the search box, it finds nothing. This is really
odd as this is a very important gene in yeast.
When we are looking for pathways, for example, the tor pathway, we can't find
that.
When we are building interaction networks in cytoscape, it only builds networks
from proteins and we need networks from genes.
Any help would be most gratefully appreciated
Dr. Tarynn M. Witten
Original issue reported on code.google.com by rod...@gmail.com on 15 Feb 2013 at 6:16
The text was updated successfully, but these errors were encountered:
The web service query
http://www.pathwaycommons.org/pc/webservice.do?version=2.0&q=SIR2&format=xml&cmd
=search works though...
Next, -
I kept trying and found that search by SIR2, in fact, returns hits sometimes
(one out of five trials)! This is weird (server issue?)
Original comment by rod...@gmail.com on 15 Feb 2013 at 6:28
Original issue reported on code.google.com by
rod...@gmail.com
on 15 Feb 2013 at 6:16The text was updated successfully, but these errors were encountered: