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Update Dockerfile
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[x] update OASIS template to match templateflow orientation and view
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a3sha2 committed Dec 27, 2020
1 parent 8979d23 commit 4c19eac
Showing 1 changed file with 4 additions and 3 deletions.
7 changes: 4 additions & 3 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -226,11 +226,12 @@ RUN echo 'export USER="${USER:=`whoami`}"' >> "$ND_ENTRYPOINT"

ADD . /xcpEngine

# add spaces
RUN bash -c \
'cd /xcpEngine \
&& wget -nv https://upenn.box.com/shared/static/nu10liz56x60iryu4kxdlsqe4igqx8ob.xz \
&& tar xvfJm nu10liz56x60iryu4kxdlsqe4igqx8ob.xz \
&& rm nu10liz56x60iryu4kxdlsqe4igqx8ob.xz'
&& wget -nv https://upenn.box.com/shared/static/x95ygarwv14sv608muz06tfrmlmo222z.xz \
&& tar xvfJmx95ygarwv14sv608muz06tfrmlmo222z.xz \
&& rm x95ygarwv14sv608muz06tfrmlmo222z.xz'


RUN bash -c 'BRAINATLAS=/xcpEngine/atlas BRAINSPACE=/xcpEngine/space XCPEDIR=/xcpEngine FSLDIR=/opt/fsl-5.0.10 AFNI_PATH=/opt/afni-latest C3D_PATH=/opt/convert3d-nightly/bin ANTSPATH=/opt/ants-latest/bin /xcpEngine/xcpReset \
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