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[PA165984799] Bad GPML for Diuretics Pathway, Pharmacodynamics #82

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pharmgen opened this issue Mar 30, 2018 · 0 comments
Open

[PA165984799] Bad GPML for Diuretics Pathway, Pharmacodynamics #82

pharmgen opened this issue Mar 30, 2018 · 0 comments
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pharmgen commented Mar 30, 2018

Latest GPML for pathwayPA165984799 is obsolete.
Use this instead: PA165984799-new.gpml

Note that even the updated GPML has errors that must be fixed:

  • 'angiotensin II' [id:a42ff]: Missing PharmGKB Accession ID.
  • 'ATP' [id:a6506]: Missing PharmGKB Accession ID.
  • 'aldosterone' [id:d70ef]: Missing PharmGKB Accession ID.
  • 'Agents Acting on the Renin-Angiotensin System Pathway, Pharmacodynamics' [id:e4d2e]: Missing cellular location.
  • 'SLC12A3' [id:fe07f]: Evidence should only be provided on interactions.
  • Activation line [id:a132c] (from 'WNK1' [id:b8de6] to 'STK39' [id:b7c15]): Missing evidence.
  • Activation line [id:ac686] (from 'WNK4' [id:f1ef1] to 'KCNJ1' [id:a4586]): Missing evidence.
  • Info Line line [id:b0a36] (from 'Agents Acting on the Renin-Angiotensin System Pathway, Pharmacodynamics' [id:e4d2e] to 'angiotensin II' [id:a42ff]): Info labels lines are no longer allowed.
  • Transport line [id:d4225] (from 'potassium' [id:ab43c] to 'potassium' [id:b268d]): Missing evidence.
  • Activation line [id:d4f43] (from 'STK39' [id:b7c15] to 'SLC12A3' [id:fe07f]): Missing evidence.
  • Activation line [id:d8b8e] (from 'ATP' [id:a6506] to 'ATP1A1' [id:f4dc7]): Missing evidence.
  • Inhibition line [id:ebb41] (from 'WNK1' [id:b8de6] to 'WNK4' [id:f1ef1]): Missing evidence.
  • 'ATP1B' [id:f5313]: Not linked to anything.
  • 'Agents Acting on the Renin-Angiotensin System Pathway, Pharmacodynamics' [id:e4d2e]: Not linked to anything.
@pharmgen pharmgen added this to the Update GPML milestone Mar 30, 2018
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