object
|
\---$matrix* = class:"matrix" (original ordinated matrix)
|
\---$call* = class:"list" (details of the methods used)
| |
| \---$subsamples = class:"character"
| |
| \---$bootstrap = class:"character"
| |
| \---$dimensions = class:"numeric"
| |
| \---$metric = class:"character"
|
\---$subsamples* = class:"list" (subsamples as a list)
| |
| \---[[1]]* = class:"list" (first item in subsamples list)
| | |
| | \---$elements* = class:"matrix" (one column matrix containing the elements within the first subsample)
| | |
| | \---[[2]] = class:"matrix" (matrix containing the bootstrap draws for the unrarefied data)
| | |
| | \---[[3]] = class:"matrix" (matrix containing the bootstrap draws for the first rarefaction level)
| | |
| | \---[[...]] = class:"matrix" (matrix containing the bootstrap draws for the second rarefaction level etc.)
| |
| \---[[2]] = class:"list" (second item in subsamples list)
| | |
| | \---$elements* = class:"matrix" (one column matrix containing the elements within the second subsample)
| | |
| | \---[[2]] = class:"matrix" (matrix containing the bootstrap draws for the unrarefied data)
| | |
| | \---[[3]] = class:"matrix" (matrix containing the bootstrap draws for the first rarefaction level)
| | |
| | \---[[...]] = class:"matrix" (matrix containing the bootstrap draws for the second rarefaction level etc.)
| | |
| | \---[[...]] = class:"list" (the following rarefactions)
| | | |
| | \---[[...]] = class:"numeric" (the bootstraps)
| |
| \---[[...]] = class:"list" (the following subsamples)
| |
| \---$elements* = class:"matrix" (a one column matrix containing the elements within this subsample)
| |
| \---[[...]] = class:"matrix" (the rarefactions)
|
\---$disparity
|
\---[[2]] = class:"list" (the first subsamples)
| |
| \---$observed* = class:"numeric" (vector containing the observed disparity within the subsamples)
| |
| \---[[2]] = class:"matrix" (matrix containing the bootstrap draws for the unrarefied data)
| |
| \---[[3]] = class:"matrix" (matrix containing the bootstrap draws for the first rarefaction level)
| |
| \---[[...]] = class:"matrix" (matrix containing the bootstrap draws for the second rarefaction level etc.)
|
\---[[2]] = class:"list" (the first subsamples)
| |
| \---$observed* = class:"numeric" (vector containing the observed disparity within the subsamples)
| |
| \---[[2]] = class:"matrix" (matrix containing the bootstrap draws for the unrarefied data)
| |
| \---[[3]] = class:"matrix" (matrix containing the bootstrap draws for the first rarefaction level)
| |
| \---[[...]] = class:"matrix" (matrix containing the bootstrap draws for the second rarefaction level etc.)
| |
| \---[[...]] = class:"list" (the following rarefactions)
| |
| \---[[...]] = class:"numeric" (the bootstraps)
|
\---[[...]] = class:"list" (the following subsamples)
|
\---$observed* = class:"numeric" (the vector containing the observed disparity within this subsamples)
|
\---[[...]] = class:"matrix" (the rarefactions)
The elements marked with an asterisk (*) are mandatory.