[WIP] Doc2vec on proteins example in iPython notebook #711
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Ping @ziky90 |
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@tmylk I still haven't made it to generate smaller example dataset for Doc2Vec on proteins. Could the PR still stay open (possibly for bioinformaticians to play with or to finish)? |
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@ziky90 This is a really nice addition! I'm interested in completing this PR As this notebook will only be for demo purposes, and accuracy of the results don't matter much, so I guess we can simply use a subset of sequences in fasta file already used in notebook, rather than whole proteome (with explicit mention of taking this approach). wdyt? |
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Ping @ziky90, what status of this PR? Will you finish it soon? |
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I close PR because it is abandoned. |
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Do not merge yet!
This PR is a draft of simple example how to use doc2vec on proteins. This aims to solve #645
TODO: