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Provide API access Dey_Deeplearning dataset #7

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bschilder opened this issue Jan 19, 2021 · 2 comments
Open

Provide API access Dey_Deeplearning dataset #7

bschilder opened this issue Jan 19, 2021 · 2 comments
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enhancement New feature or request

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@bschilder
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Break up and store files from Dey_DeepLearning.tgz in a GitHub repo so users don't have to download entire dataset (37GB).

Extend DEEPLEARNING. to connect to these remote resources by default.

Ideally, will tabix-index all files as well to improve querying speed.

Reference:

Evaluating the informativeness of deep learning annotations for human complex diseases

@bschilder bschilder added the enhancement New feature or request label Jan 19, 2021
@bschilder
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@bschilder
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Would like to do the same for SpliceAI results, tho need to check the license agreement first.
https://github.com/Illumina/SpliceAI

@bschilder bschilder transferred this issue from RajLabMSSM/echolocatoR Aug 27, 2022
@bschilder bschilder self-assigned this Aug 28, 2022
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