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matTE_closest_gene_v2.txt
154 lines (154 loc) · 29.1 KB
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matTE_closest_gene_v2.txt
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ID=RIL00010Zm00001d00001;Name=RIL00010Zm00001d00001_rebaew_CCCGCTTTACAACTGTC ID=Zm00001d028456;biotype=protein_coding;description=Zm00001d028456;gene_id=Zm00001d028456;logic_name=maker_gene -1569
ID=RLG00001Zm00001d15164;Name=RLG00001Zm00001d15164_cinful-zeon_LTRsimilarity92.42 ID=Zm00001d028540;biotype=protein_coding;description=Josephin-2 [Source:UniProtKB/TrEMBL%3BAcc:B6T783];gene_id=Zm00001d028540;logic_name=maker_gene -32
ID=RLC00118Zm00001d00022;Name=RLC00118Zm00001d00022_NA_LTRsimilarity96.93 ID=Zm00001d028540;biotype=protein_coding;description=Josephin-2 [Source:UniProtKB/TrEMBL%3BAcc:B6T783];gene_id=Zm00001d028540;logic_name=maker_gene -5072
ID=DHH00002Zm00001d00507;Name=DHH00002Zm00001d00507_Hip1_LCV5p10_LCV3p6 ID=Zm00001d028611;biotype=protein_coding;description=Zm00001d028611;gene_id=Zm00001d028611;logic_name=maker_gene -188
ID=DHH00002Zm00001d06247;Name=DHH00002Zm00001d06247_Hip1_LCV5p22_LCV3p41 ID=Zm00001d029042;biotype=protein_coding;description=Zm00001d029042;gene_id=Zm00001d029042;logic_name=maker_gene 0
ID=DTC00041Zm00001d00003;Name=DTC00041Zm00001d00003_AAA_CACTATACCACAAC_mismatch-0_GTTGTGGTATAGTG ID=Zm00001d029275;biotype=protein_coding;description=Zm00001d029275;gene_id=Zm00001d029275;logic_name=maker_gene -916
ID=DHH00002Zm00001d06283;Name=DHH00002Zm00001d06283_Hip1_LCV5p26_LCV3p36 ID=Zm00001d029431;biotype=protein_coding;description=Zm00001d029431;gene_id=Zm00001d029431;logic_name=maker_gene 0
ID=DTC00094Zm00001d00004;Name=DTC00094Zm00001d00004_TCA_ATTATA_mismatch-0_TATAAT ID=Zm00001d030232;biotype=protein_coding;description=Zm00001d030232;gene_id=Zm00001d030232;logic_name=maker_gene -75947
ID=RLX18102Zm00001d00001;Name=RLX18102Zm00001d00001_NA_LTRsimilarity92.33 ID=Zm00001d031139;biotype=protein_coding;description=Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL%3BAcc:A0A1D6KGP5];gene_id=Zm00001d031139;logic_name=maker_gene 0
ID=DHH00001Zm00001d01015;Name=DHH00001Zm00001d01015_NA_LCV5p6_LCV3p8 ID=Zm00001d022869;biotype=lincRNA;gene_id=Zm00001d022869;logic_name=lncrna_gene 1355
ID=DHH00025Zm00001d00004;Name=DHH00025Zm00001d00004_NA_LCV5p8_LCV3p6 ID=Zm00001d031398;biotype=protein_coding;description=Serine/threonine-protein kinase [Source:UniProtKB/TrEMBL%3BAcc:A0A1D6KII4];gene_id=Zm00001d031398;logic_name=maker_gene 8574
ID=RLG00003Zm00001d01354;Name=RLG00003Zm00001d01354_huck_LTRsimilarity91.79 ID=Zm00001d031633;biotype=protein_coding;description=Zm00001d031633;gene_id=Zm00001d031633;logic_name=maker_gene -925
ID=DHH00002Zm00001d06580;Name=DHH00002Zm00001d06580_Hip1_LCV5p14_LCV3p50 ID=Zm00001d032105;biotype=protein_coding;description=Zm00001d032105;gene_id=Zm00001d032105;logic_name=maker_gene 0
ID=DHH00002Zm00001d06580;Name=DHH00002Zm00001d06580_Hip1_LCV5p14_LCV3p50 ID=Zm00001d032106;biotype=protein_coding;description=Zm00001d032106;gene_id=Zm00001d032106;logic_name=maker_gene 0
ID=DHH00002Zm00001d00893;Name=DHH00002Zm00001d00893_Hip1_LCV5p12_LCV3p53 ID=Zm00001d032128;biotype=protein_coding;description=Zm00001d032128;gene_id=Zm00001d032128;logic_name=maker_gene 0
ID=RLX17271Zm00001d00001;Name=RLX17271Zm00001d00001_NA_LTRsimilarity85.05 ID=Zm00001d032321;biotype=protein_coding;description=Zm00001d032321;gene_id=Zm00001d032321;logic_name=maker_gene -99
ID=DHH00002Zm00001d00938;Name=DHH00002Zm00001d00938_Hip1_LCV5p10_LCV3p48 ID=Zm00001d032429;biotype=protein_coding;description=Zm00001d032429;gene_id=Zm00001d032429;logic_name=maker_gene 9315
ID=DHH00108Zm00001d00006;Name=DHH00108Zm00001d00006_NA_LCV5p11_LCV3p6 ID=Zm00001d032563;biotype=protein_coding;description=Zm00001d032563;gene_id=Zm00001d032563;logic_name=maker_gene 0
ID=DHH00108Zm00001d00006;Name=DHH00108Zm00001d00006_NA_LCV5p11_LCV3p6 ID=Zm00001d032564;biotype=protein_coding;description=Zm00001d032564;gene_id=Zm00001d032564;logic_name=maker_gene 0
ID=RLX14129Zm00001d00001;Name=RLX14129Zm00001d00001_NA_LTRsimilarity88.7 ID=Zm00001d033342;biotype=protein_coding;description=Zm00001d033342;gene_id=Zm00001d033342;logic_name=maker_gene 761
ID=DTA00091Zm00001d00022;Name=DTA00091Zm00001d00022_GAATAGAA_CATTGTTATTAAAACG_mismatch-1_CGTTTTAATAACCATG ID=Zm00001d033342;biotype=protein_coding;description=Zm00001d033342;gene_id=Zm00001d033342;logic_name=maker_gene 3570
ID=DHH00002Zm00001d06697;Name=DHH00002Zm00001d06697_Hip1_LCV5p24_LCV3p5 ID=Zm00001d033351;biotype=protein_coding;description=Zm00001d033351;gene_id=Zm00001d033351;logic_name=maker_gene -36085
ID=DHH00002Zm00001d01151;Name=DHH00002Zm00001d01151_Hip1_LCV5p11_LCV3p46 ID=Zm00001d034566;biotype=protein_coding;description=Zm00001d034566;gene_id=Zm00001d034566;logic_name=maker_gene 114
ID=DHH00002Zm00001d01158;Name=DHH00002Zm00001d01158_Hip1_LCV5p11_LCV3p14 ID=Zm00001d034631;biotype=tRNA;gene_id=Zm00001d034631;logic_name=maker_trnascan -272
ID=RLX13978Zm00001d00001;Name=RLX13978Zm00001d00001_NA_LTRsimilarity95.02 ID=Zm00001d034633;biotype=protein_coding;description=Zm00001d034633;gene_id=Zm00001d034633;logic_name=maker_gene 1667
ID=RLX16337Zm00001d00001;Name=RLX16337Zm00001d00001_NA_LTRsimilarity89.9 ID=Zm00001d023272;biotype=protein_coding;description=Zm00001d023272;gene_id=Zm00001d023272;logic_name=maker_gene 0
ID=RLX18391Zm00001d00001;Name=RLX18391Zm00001d00001_NA_LTRsimilarity92.6 ID=Zm00001d023039;biotype=lincRNA;gene_id=Zm00001d023039;logic_name=lncrna_gene 0
ID=RLX18391Zm00001d00001;Name=RLX18391Zm00001d00001_NA_LTRsimilarity92.6 ID=Zm00001d023040;biotype=lincRNA;gene_id=Zm00001d023040;logic_name=lncrna_gene 0
ID=RLX20880Zm00001d00001;Name=RLX20880Zm00001d00001_NA_LTRsimilarity97.4 ID=Zm00001d023040;biotype=lincRNA;gene_id=Zm00001d023040;logic_name=lncrna_gene 0
ID=RLX19072Zm00001d00001;Name=RLX19072Zm00001d00001_NA_LTRsimilarity95.8 ID=Zm00001d023040;biotype=lincRNA;gene_id=Zm00001d023040;logic_name=lncrna_gene 0
ID=RLX18125Zm00001d00001;Name=RLX18125Zm00001d00001_NA_LTRsimilarity87.8 ID=Zm00001d023341;biotype=protein_coding;description=Putative RING zinc finger domain superfamily protein [Source:UniProtKB/TrEMBL%3BAcc:K7TED8];gene_id=Zm00001d023341;logic_name=maker_gene 3928
ID=RLG00003Zm00001d00016;Name=RLG00003Zm00001d00016_huck_LTRsimilarity87.23 ID=Zm00001d023510;biotype=protein_coding;description=Zm00001d023510;gene_id=Zm00001d023510;logic_name=maker_gene -4983
ID=RLG00001Zm00001d00091;Name=RLG00001Zm00001d00091_cinful-zeon_LTRsimilarity97.39 ID=Zm00001d023767;biotype=protein_coding;description=Zm00001d023767;gene_id=Zm00001d023767;logic_name=maker_gene -24008
ID=RLX19061Zm00001d00001;Name=RLX19061Zm00001d00001_NA_LTRsimilarity90.44 ID=Zm00001d023985;biotype=protein_coding;description=Zm00001d023985;gene_id=Zm00001d023985;logic_name=maker_gene 0
ID=RLX19061Zm00001d00001;Name=RLX19061Zm00001d00001_NA_LTRsimilarity90.44 ID=Zm00001d023089;biotype=lincRNA;gene_id=Zm00001d023089;logic_name=lncrna_gene 0
ID=RLG00567Zm00001d00001;Name=RLG00567Zm00001d00001_nopip_LTRsimilarity93.64 ID=Zm00001d024300;biotype=protein_coding;description=Potassium transporter [Source:UniProtKB/TrEMBL%3BAcc:A0A1D6IYL1];gene_id=Zm00001d024300;logic_name=maker_gene -57538
ID=RLG03431Zm00001d00001;Name=RLG03431Zm00001d00001_NA_LTRsimilarity91.51 ID=Zm00001d023118;biotype=lincRNA;gene_id=Zm00001d023118;logic_name=lncrna_gene 0
ID=DHH00002Zm00001d00133;Name=DHH00002Zm00001d00133_Hip1_LCV5p8_LCV3p50 ID=Zm00001d024498;biotype=protein_coding;description=Zm00001d024498;gene_id=Zm00001d024498;logic_name=maker_gene 13387
ID=RLG20798Zm00001d00001;Name=RLG20798Zm00001d00001_NA_LTRsimilarity90.24 ID=Zm00001d024912;biotype=protein_coding;description=Zm00001d024912;gene_id=Zm00001d024912;logic_name=maker_gene 80463
ID=DHH00002Zm00001d00214;Name=DHH00002Zm00001d00214_Hip1_LCV5p5_LCV3p48 ID=Zm00001d024969;biotype=protein_coding;description=Dirigent protein [Source:UniProtKB/TrEMBL%3BAcc:K7TN69];gene_id=Zm00001d024969;logic_name=maker_gene 1011
ID=DHH00002Zm00001d00287;Name=DHH00002Zm00001d00287_Hip1_LCV5p22_LCV3p50 ID=Zm00001d025544;biotype=protein_coding;description=Zm00001d025544;gene_id=Zm00001d025544;logic_name=maker_gene -2515
ID=RLC00002Zm00001d00679;Name=RLC00002Zm00001d00679_ji_LTRsimilarity99.55 ID=Zm00001d026623;biotype=protein_coding;description=Zm00001d026623;gene_id=Zm00001d026623;logic_name=maker_gene -797
ID=DHH00002Zm00001d01250;Name=DHH00002Zm00001d01250_Hip1_LCV5p26_LCV3p43 ID=Zm00001d002616;biotype=protein_coding;description=Zm00001d002616;gene_id=Zm00001d002616;logic_name=maker_gene 73
ID=RLG00018Zm00001d00068;Name=RLG00018Zm00001d00068_puck_LTRsimilarity96.19 ID=Zm00001d002809;biotype=protein_coding;description=Zm00001d002809;gene_id=Zm00001d002809;logic_name=maker_gene 51091
ID=RLC00002Zm00001d11458;Name=RLC00002Zm00001d11458_ji_LTRsimilarity98.63 ID=Zm00001d003523;biotype=protein_coding;description=Zm00001d003523;gene_id=Zm00001d003523;logic_name=maker_gene 1275
ID=DHH00002Zm00001d01432;Name=DHH00002Zm00001d01432_Hip1_LCV5p25_LCV3p43 ID=Zm00001d004147;biotype=protein_coding;description=Zm00001d004147;gene_id=Zm00001d004147;logic_name=maker_gene 0
ID=DTC00017Zm00001d00009;Name=DTC00017Zm00001d00009_TTT_GCCCAATGT_mismatch-0_ACATTGGGC ID=Zm00001d004291;biotype=protein_coding;description=Zm00001d004291;gene_id=Zm00001d004291;logic_name=maker_gene -73287
ID=RLG01121Zm00001d00004;Name=RLG01121Zm00001d00004_NA_LTRsimilarity87.14 ID=Zm00001d000917;biotype=lincRNA;gene_id=Zm00001d000917;logic_name=lncrna_gene -24401
ID=RLG00005Zm00001d01031;Name=RLG00005Zm00001d01031_xilon-diguus_LTRsimilarity94.8 ID=Zm00001d005612;biotype=protein_coding;description=Zm00001d005612;gene_id=Zm00001d005612;logic_name=maker_gene -8695
ID=RLC02716Zm00001d00002;Name=RLC02716Zm00001d00002_NA_LTRsimilarity90.57 ID=Zm00001d005712;biotype=protein_coding;description=SURF1-like protein [Source:UniProtKB/TrEMBL%3BAcc:A0A1D6EPK7];gene_id=Zm00001d005712;logic_name=maker_gene -29185
ID=RLG00003Zm00001d02516;Name=RLG00003Zm00001d02516_huck_LTRsimilarity99.13 ID=Zm00001d005712;biotype=protein_coding;description=SURF1-like protein [Source:UniProtKB/TrEMBL%3BAcc:A0A1D6EPK7];gene_id=Zm00001d005712;logic_name=maker_gene -3087
ID=DHH00002Zm00001d01678;Name=DHH00002Zm00001d01678_Hip1_LCV5p13_LCV3p50 ID=Zm00001d005777;biotype=protein_coding;description=Zm00001d005777;gene_id=Zm00001d005777;logic_name=maker_gene 0
ID=DHH00002Zm00001d07283;Name=DHH00002Zm00001d07283_Hip1_LCV5p25_LCV3p50 ID=Zm00001d006408;biotype=protein_coding;description=Zm00001d006408;gene_id=Zm00001d006408;logic_name=maker_gene -29083
ID=DHH00002Zm00001d07327;Name=DHH00002Zm00001d07327_Hip1_LCV5p24_LCV3p19 ID=Zm00001d007041;biotype=protein_coding;description=Zm00001d007041;gene_id=Zm00001d007041;logic_name=maker_gene -1832
ID=RLC00004Zm00001d02983;Name=RLC00004Zm00001d02983_opie_LTRsimilarity99.14 ID=Zm00001d007488;biotype=protein_coding;description=Zm00001d007488;gene_id=Zm00001d007488;logic_name=maker_gene -852
ID=DHH00002Zm00001d01879;Name=DHH00002Zm00001d01879_Hip1_LCV5p7_LCV3p50 ID=Zm00001d007873;biotype=protein_coding;description=Zm00001d007873;gene_id=Zm00001d007873;logic_name=maker_gene 0
ID=DHH00002Zm00001d01879;Name=DHH00002Zm00001d01879_Hip1_LCV5p7_LCV3p50 ID=Zm00001d007874;biotype=protein_coding;description=Zm00001d007874;gene_id=Zm00001d007874;logic_name=maker_gene 0
ID=DHH00002Zm00001d01879;Name=DHH00002Zm00001d01879_Hip1_LCV5p7_LCV3p50 ID=Zm00001d007875;biotype=protein_coding;description=Zm00001d007875;gene_id=Zm00001d007875;logic_name=maker_gene 0
ID=DHH00002Zm00001d07414;Name=DHH00002Zm00001d07414_Hip1_LCV5p10_LCV3p50 ID=Zm00001d039418;biotype=protein_coding;description=Zm00001d039418;gene_id=Zm00001d039418;logic_name=maker_gene 0
ID=DHH00002Zm00001d01939;Name=DHH00002Zm00001d01939_Hip1_LCV5p24_LCV3p50 ID=Zm00001d039839;biotype=protein_coding;description=Zm00001d039839;gene_id=Zm00001d039839;logic_name=maker_gene 0
ID=RLC00064Zm00001d00024;Name=RLC00064Zm00001d00024_tuteh_LTRsimilarity97.62 ID=Zm00001d040263;biotype=protein_coding;description=Zm00001d040263;gene_id=Zm00001d040263;logic_name=maker_gene 22794
ID=RLX12433Zm00001d00001;Name=RLX12433Zm00001d00001_NA_LTRsimilarity96.55 ID=Zm00001d040264;biotype=protein_coding;description=Zm00001d040264;gene_id=Zm00001d040264;logic_name=maker_gene 30366
ID=RLC00986Zm00001d00001;Name=RLC00986Zm00001d00001_NA_LTRsimilarity88.34 ID=Zm00001d040635;biotype=protein_coding;description=Zm00001d040635;gene_id=Zm00001d040635;logic_name=maker_gene 0
ID=RLG00005Zm00001d01209;Name=RLG00005Zm00001d01209_xilon-diguus_LTRsimilarity93.46 ID=Zm00001d040728;biotype=protein_coding;description=Zm00001d040728;gene_id=Zm00001d040728;logic_name=maker_gene -25416
ID=RLX11772Zm00001d00001;Name=RLX11772Zm00001d00001_NA_LTRsimilarity95.12 ID=Zm00001d041755;biotype=protein_coding;description=Zm00001d041755;gene_id=Zm00001d041755;logic_name=maker_gene -1453
ID=DHH00002Zm00001d07691;Name=DHH00002Zm00001d07691_Hip1_LCV5p10_LCV3p17 ID=Zm00001d041887;biotype=protein_coding;description=Zm00001d041887;gene_id=Zm00001d041887;logic_name=maker_gene 0
ID=DHH00002Zm00001d07691;Name=DHH00002Zm00001d07691_Hip1_LCV5p10_LCV3p17 ID=Zm00001d041888;biotype=protein_coding;description=Zm00001d041888;gene_id=Zm00001d041888;logic_name=maker_gene 0
ID=DHH00002Zm00001d07691;Name=DHH00002Zm00001d07691_Hip1_LCV5p10_LCV3p17 ID=Zm00001d041889;biotype=protein_coding;description=Zm00001d041889;gene_id=Zm00001d041889;logic_name=maker_gene 0
ID=RLX20422Zm00001d00001;Name=RLX20422Zm00001d00001_NA_LTRsimilarity85.83 ID=Zm00001d041905;biotype=protein_coding;description=Zm00001d041905;gene_id=Zm00001d041905;logic_name=maker_gene 0
ID=DHH00002Zm00001d02226;Name=DHH00002Zm00001d02226_Hip1_LCV5p15_LCV3p52 ID=Zm00001d042074;biotype=protein_coding;description=Zm00001d042074;gene_id=Zm00001d042074;logic_name=maker_gene -105
ID=DHH00002Zm00001d02285;Name=DHH00002Zm00001d02285_Hip1_LCV5p18_LCV3p50 ID=Zm00001d042533;biotype=protein_coding;description=Zm00001d042533;gene_id=Zm00001d042533;logic_name=maker_gene -38408
ID=DHH00002Zm00001d02327;Name=DHH00002Zm00001d02327_Hip1_LCV5p12_LCV3p7 ID=Zm00001d042959;biotype=protein_coding;description=Zm00001d042959;gene_id=Zm00001d042959;logic_name=maker_gene 0
ID=RLC00004Zm00001d09538;Name=RLC00004Zm00001d09538_opie_LTRsimilarity98.17 ID=Zm00001d043564;biotype=protein_coding;description=Zm00001d043564;gene_id=Zm00001d043564;logic_name=maker_gene -1829
ID=RLX11447Zm00001d00001;Name=RLX11447Zm00001d00001_NA_LTRsimilarity91.36 ID=Zm00001d043716;biotype=protein_coding;description=Zm00001d043716;gene_id=Zm00001d043716;logic_name=maker_gene 1670
ID=RLX11446Zm00001d00001;Name=RLX11446Zm00001d00001_NA_LTRsimilarity95.41 ID=Zm00001d043716;biotype=protein_coding;description=Zm00001d043716;gene_id=Zm00001d043716;logic_name=maker_gene 0
ID=RLC02124Zm00001d00003;Name=RLC02124Zm00001d00003_NA_LTRsimilarity95.99 ID=Zm00001d044358;biotype=protein_coding;description=Zm00001d044358;gene_id=Zm00001d044358;logic_name=maker_gene 246
ID=DHH00002Zm00001d07889;Name=DHH00002Zm00001d07889_Hip1_LCV5p23_LCV3p50 ID=Zm00001d044463;biotype=protein_coding;description=Zm00001d044463;gene_id=Zm00001d044463;logic_name=maker_gene -8658
ID=DHH00002Zm00001d02512;Name=DHH00002Zm00001d02512_Hip1_LCV5p24_LCV3p50 ID=Zm00001d048646;biotype=protein_coding;description=Zm00001d048646;gene_id=Zm00001d048646;logic_name=maker_gene 0
ID=DHH00002Zm00001d02558;Name=DHH00002Zm00001d02558_Hip1_LCV5p8_LCV3p16 ID=Zm00001d049109;biotype=protein_coding;description=Zm00001d049109;gene_id=Zm00001d049109;logic_name=maker_gene -46880
ID=DHH00002Zm00001d08010;Name=DHH00002Zm00001d08010_Hip1_LCV5p15_LCV3p11 ID=Zm00001d049603;biotype=protein_coding;description=Zm00001d049603;gene_id=Zm00001d049603;logic_name=maker_gene 0
ID=RLX11107Zm00001d00001;Name=RLX11107Zm00001d00001_NA_LTRsimilarity98.03 ID=Zm00001d049603;biotype=protein_coding;description=Zm00001d049603;gene_id=Zm00001d049603;logic_name=maker_gene -4070
ID=RLC03925Zm00001d00002;Name=RLC03925Zm00001d00002_wawo_LTRsimilarity98.39 ID=Zm00001d049640;biotype=protein_coding;description=Zm00001d049640;gene_id=Zm00001d049640;logic_name=maker_gene -925
ID=DHH00002Zm00001d08031;Name=DHH00002Zm00001d08031_Hip1_LCV5p11_LCV3p15 ID=Zm00001d049797;biotype=protein_coding;description=Zm00001d049797;gene_id=Zm00001d049797;logic_name=maker_gene 0
ID=DHH00008Zm00001d00354;Name=DHH00008Zm00001d00354_NA_LCV5p9_LCV3p5 ID=Zm00001d049938;biotype=protein_coding;description=Zm00001d049938;gene_id=Zm00001d049938;logic_name=maker_gene 30985
ID=DHH00002Zm00001d02687;Name=DHH00002Zm00001d02687_Hip1_LCV5p7_LCV3p5 ID=Zm00001d050068;biotype=protein_coding;description=Zm00001d050068;gene_id=Zm00001d050068;logic_name=maker_gene 0
ID=DTT00046Zm00001d00001;Name=DTT00046Zm00001d00001_TA_AAGTATTTTT_mismatch-0_AAAAATACTT ID=Zm00001d026835;biotype=lincRNA;gene_id=Zm00001d026835;logic_name=lncrna_gene 0
ID=RLX22809Zm00001d00001;Name=RLX22809Zm00001d00001_NA_LTRsimilarity95.73 ID=Zm00001d050518;biotype=protein_coding;description=MAC/Perforin domain containing protein [Source:UniProtKB/TrEMBL%3BAcc:K7TWM4];gene_id=Zm00001d050518;logic_name=maker_gene 83612
ID=RLX17263Zm00001d00001;Name=RLX17263Zm00001d00001_NA_LTRsimilarity87 ID=Zm00001d050548;biotype=protein_coding;description=Zm00001d050548;gene_id=Zm00001d050548;logic_name=maker_gene 0
ID=DTH00017Zm00001d00003;Name=DTH00017Zm00001d00003_TTA_GGGCTCCTTTGGAT_mismatch-0_ATCCAAAGGAGCCC ID=Zm00001d050962;biotype=protein_coding;description=Zm00001d050962;gene_id=Zm00001d050962;logic_name=maker_gene -59315
ID=DHH00002Zm00001d02929;Name=DHH00002Zm00001d02929_Hip1_LCV5p9_LCV3p9 ID=Zm00001d051736;biotype=protein_coding;description=Putative RING zinc finger domain superfamily protein [Source:UniProtKB/TrEMBL%3BAcc:B4FL43];gene_id=Zm00001d051736;logic_name=maker_gene 1186
ID=DHH00002Zm00001d08326;Name=DHH00002Zm00001d08326_Hip1_LCV5p8_LCV3p50 ID=Zm00001d052389;biotype=protein_coding;description=Zm00001d052389;gene_id=Zm00001d052389;logic_name=maker_gene 239
ID=RLG00193Zm00001d00004;Name=RLG00193Zm00001d00004_NA_LTRsimilarity89.4 ID=Zm00001d026968;biotype=lincRNA;gene_id=Zm00001d026968;logic_name=lncrna_gene 0
ID=RLG00005Zm00001d01844;Name=RLG00005Zm00001d01844_xilon-diguus_LTRsimilarity97.41 ID=Zm00001d052949;biotype=protein_coding;description=Zm00001d052949;gene_id=Zm00001d052949;logic_name=maker_gene 21749
ID=RLX17472Zm00001d00001;Name=RLX17472Zm00001d00001_NA_LTRsimilarity89.43 ID=Zm00001d053049;biotype=protein_coding;description=ATPase%2C coupled to transmembrane movement of substance [Source:UniProtKB/TrEMBL%3BAcc:B6SWU8];gene_id=Zm00001d053049;logic_name=maker_gene -102351
ID=DTA00332Zm00001d00001;Name=DTA00332Zm00001d00001_TGTCGGAG_TAGGGATGAAAACGGGACGG_mismatch-0_CCGTCCCGTTTTCATCCCTA ID=Zm00001d053223;biotype=protein_coding;description=Zm00001d053223;gene_id=Zm00001d053223;logic_name=maker_gene -8216
ID=DHH00002Zm00001d03096;Name=DHH00002Zm00001d03096_Hip1_LCV5p18_LCV3p50 ID=Zm00001d053398;biotype=protein_coding;description=Zm00001d053398;gene_id=Zm00001d053398;logic_name=maker_gene 0
ID=DTA00136Zm00001d00016;Name=DTA00136Zm00001d00016_ATCCCTTG_CATGCTTATTAAAACGACG_mismatch-2_CGTCGTTTTAATAACCTTG ID=Zm00001d053607;biotype=protein_coding;description=Zm00001d053607;gene_id=Zm00001d053607;logic_name=maker_gene 3726
ID=DHH00002Zm00001d08453;Name=DHH00002Zm00001d08453_Hip1_LCV5p8_LCV3p11 ID=Zm00001d053765;biotype=protein_coding;description=Putative ATPase%2C V1 complex%2C subunit A protein [Source:UniProtKB/TrEMBL%3BAcc:C0PHC0];gene_id=Zm00001d053765;logic_name=maker_gene 0
ID=RLG00405Zm00001d00003;Name=RLG00405Zm00001d00003_ovikoh_LTRsimilarity98.91 ID=Zm00001d053832;biotype=protein_coding;description=Zm00001d053832;gene_id=Zm00001d053832;logic_name=maker_gene 1215
ID=DHH00002Zm00001d03158;Name=DHH00002Zm00001d03158_Hip1_LCV5p17_LCV3p50 ID=Zm00001d012805;biotype=protein_coding;description=Zm00001d012805;gene_id=Zm00001d012805;logic_name=maker_gene 0
ID=DHH00002Zm00001d03253;Name=DHH00002Zm00001d03253_Hip1_LCV5p9_LCV3p19 ID=Zm00001d014003;biotype=protein_coding;description=Zm00001d014003;gene_id=Zm00001d014003;logic_name=maker_gene -820
ID=RLG00006Zm00001d01631;Name=RLG00006Zm00001d01631_flip_LTRsimilarity97.07 ID=Zm00001d014449;biotype=protein_coding;description=Chromdomain-containing protein CRD101 [Source:UniProtKB/TrEMBL%3BAcc:Q8LK11];gene_id=Zm00001d014449;logic_name=maker_gene -73990
ID=RLC00004Zm00001d05383;Name=RLC00004Zm00001d05383_opie_LTRsimilarity99.37 ID=Zm00001d015201;biotype=protein_coding;description=Zm00001d015201;gene_id=Zm00001d015201;logic_name=maker_gene -4404
ID=DHH00003Zm00001d01552;Name=DHH00003Zm00001d01552_NA_LCV5p8_LCV3p5 ID=Zm00001d015201;biotype=protein_coding;description=Zm00001d015201;gene_id=Zm00001d015201;logic_name=maker_gene -12365
ID=RLG00001Zm00001d08026;Name=RLG00001Zm00001d08026_cinful-zeon_LTRsimilarity87.53 ID=Zm00001d015729;biotype=protein_coding;description=Zm00001d015729;gene_id=Zm00001d015729;logic_name=maker_gene -186187
ID=DHH00001Zm00001d09025;Name=DHH00001Zm00001d09025_NA_LCV5p22_LCV3p9 ID=Zm00001d016488;biotype=protein_coding;description=Zm00001d016488;gene_id=Zm00001d016488;logic_name=maker_gene 0
ID=DHH00001Zm00001d09025;Name=DHH00001Zm00001d09025_NA_LCV5p22_LCV3p9 ID=Zm00001d016489;biotype=protein_coding;description=Zm00001d016489;gene_id=Zm00001d016489;logic_name=maker_gene 0
ID=DHH00002Zm00001d08890;Name=DHH00002Zm00001d08890_Hip1_LCV5p12_LCV3p6 ID=Zm00001d017481;biotype=protein_coding;description=Zm00001d017481;gene_id=Zm00001d017481;logic_name=maker_gene 1078
ID=DHH01373Zm00001d00001;Name=DHH01373Zm00001d00001_NA_LCV5p11_LCV3p5 ID=Zm00001d017510;biotype=protein_coding;description=Cortical cell-delineating protein [Source:UniProtKB/TrEMBL%3BAcc:B6T026];gene_id=Zm00001d017510;logic_name=maker_gene 37829
ID=RLX08835Zm00001d00001;Name=RLX08835Zm00001d00001_NA_LTRsimilarity98.74 ID=Zm00001d018263;biotype=protein_coding;description=Zm00001d018263;gene_id=Zm00001d018263;logic_name=maker_gene 4708
ID=RLX23000Zm00001d00001;Name=RLX23000Zm00001d00001_NA_LTRsimilarity98.64 ID=Zm00001d018265;biotype=protein_coding;description=Zm00001d018265;gene_id=Zm00001d018265;logic_name=maker_gene -8928
ID=RLX19640Zm00001d00001;Name=RLX19640Zm00001d00001_NA_LTRsimilarity90.26 ID=Zm00001d035394;biotype=protein_coding;description=Zm00001d035394;gene_id=Zm00001d035394;logic_name=maker_gene 9537
ID=RLX08643Zm00001d00001;Name=RLX08643Zm00001d00001_NA_LTRsimilarity91.91 ID=Zm00001d001316;biotype=lincRNA;gene_id=Zm00001d001316;logic_name=lncrna_gene -11810
ID=DHH00015Zm00001d00077;Name=DHH00015Zm00001d00077_NA_LCV5p10_LCV3p5 ID=Zm00001d001316;biotype=lincRNA;gene_id=Zm00001d001316;logic_name=lncrna_gene -15752
ID=DHH00015Zm00001d00078;Name=DHH00015Zm00001d00078_NA_LCV5p6_LCV3p5 ID=Zm00001d001316;biotype=lincRNA;gene_id=Zm00001d001316;logic_name=lncrna_gene -9824
ID=RLG00021Zm00001d00530;Name=RLG00021Zm00001d00530_NA_LTRsimilarity88.39 ID=Zm00001d035716;biotype=tRNA;gene_id=Zm00001d035716;logic_name=maker_trnascan -13401
ID=DTX12739Zm00001d00001;Name=DTX12739Zm00001d00001_TTA_GGATGCGTTTGGTT_mismatch-0_AACCAAACGCATCC ID=Zm00001d036164;biotype=protein_coding;description=Zm00001d036164;gene_id=Zm00001d036164;logic_name=maker_gene -428
ID=DHH00002Zm00001d04010;Name=DHH00002Zm00001d04010_Hip1_LCV5p24_LCV3p19 ID=Zm00001d036800;biotype=protein_coding;description=Zm00001d036800;gene_id=Zm00001d036800;logic_name=maker_gene -245
ID=DHH00002Zm00001d09161;Name=DHH00002Zm00001d09161_Hip1_LCV5p24_LCV3p14 ID=Zm00001d037045;biotype=protein_coding;description=Zm00001d037045;gene_id=Zm00001d037045;logic_name=maker_gene 0
ID=DHH00002Zm00001d04065;Name=DHH00002Zm00001d04065_Hip1_LCV5p24_LCV3p51 ID=Zm00001d037304;biotype=protein_coding;description=Zm00001d037304;gene_id=Zm00001d037304;logic_name=maker_gene -17402
ID=RLG00017Zm00001dS0065;Name=RLG00017Zm00001dS0065_TCACT ID=Zm00001d038034;biotype=protein_coding;description=Zm00001d038034;gene_id=Zm00001d038034;logic_name=maker_gene -2662
ID=RLC00096Zm00001d00005;Name=RLC00096Zm00001d00005_NA_LTRsimilarity91.56 ID=Zm00001d038099;biotype=protein_coding;description=Zm00001d038099;gene_id=Zm00001d038099;logic_name=maker_gene 0
ID=RLX07811Zm00001d00001;Name=RLX07811Zm00001d00001_NA_LTRsimilarity98.47 ID=Zm00001d039070;biotype=protein_coding;description=Zm00001d039070;gene_id=Zm00001d039070;logic_name=maker_gene -962
ID=DHH00002Zm00001d04399;Name=DHH00002Zm00001d04399_Hip1_LCV5p7_LCV3p31 ID=Zm00001d019734;biotype=protein_coding;description=Zm00001d019734;gene_id=Zm00001d019734;logic_name=maker_gene -98864
ID=RLG17708Zm00001d00001;Name=RLG17708Zm00001d00001_NA_LTRsimilarity98.94 ID=Zm00001d019842;biotype=protein_coding;description=Zm00001d019842;gene_id=Zm00001d019842;logic_name=maker_gene -25448
ID=RLC07133Zm00001d00001;Name=RLC07133Zm00001d00001_NA_LTRsimilarity94.24 ID=Zm00001d020312;biotype=protein_coding;description=Zm00001d020312;gene_id=Zm00001d020312;logic_name=maker_gene -827
ID=RLC00002Zm00001d15019;Name=RLC00002Zm00001d15019_ji_LTRsimilarity94.32 ID=Zm00001d001233;biotype=lincRNA;gene_id=Zm00001d001233;logic_name=lncrna_gene 0
ID=RLC00014Zm00001d00680;Name=RLC00014Zm00001d00680_ji_LTRsimilarity96.85 ID=Zm00001d022052;biotype=protein_coding;description=Zm00001d022052;gene_id=Zm00001d022052;logic_name=maker_gene -7066
ID=RLX21573Zm00001d00001;Name=RLX21573Zm00001d00001_NA_LTRsimilarity85.45 ID=Zm00001d008468;biotype=protein_coding;description=Zm00001d008468;gene_id=Zm00001d008468;logic_name=maker_gene 2217
ID=DHH00002Zm00001d04759;Name=DHH00002Zm00001d04759_Hip1_LCV5p24_LCV3p19 ID=Zm00001d008722;biotype=protein_coding;description=Zm00001d008722;gene_id=Zm00001d008722;logic_name=maker_gene -2260
ID=DHH00015Zm00001d00266;Name=DHH00015Zm00001d00266_NA_LCV5p10_LCV3p22 ID=Zm00001d008019;biotype=lincRNA;gene_id=Zm00001d008019;logic_name=lncrna_gene 0
ID=RLX06566Zm00001d00001;Name=RLX06566Zm00001d00001_NA_LTRsimilarity93.58 ID=Zm00001d008019;biotype=lincRNA;gene_id=Zm00001d008019;logic_name=lncrna_gene -6036
ID=RLX21438Zm00001d00001;Name=RLX21438Zm00001d00001_NA_LTRsimilarity90.13 ID=Zm00001d009114;biotype=protein_coding;description=Zm00001d009114;gene_id=Zm00001d009114;logic_name=maker_gene 0
ID=RLC21263Zm00001d00001;Name=RLC21263Zm00001d00001_NA_LTRsimilarity87.16 ID=Zm00001d009641;biotype=protein_coding;description=Zm00001d009641;gene_id=Zm00001d009641;logic_name=maker_gene 0
ID=DHH00002Zm00001d09973;Name=DHH00002Zm00001d09973_Hip1_LCV5p25_LCV3p20 ID=Zm00001d008055;biotype=lincRNA;gene_id=Zm00001d008055;logic_name=lncrna_gene 0
ID=RLG02443Zm00001d00001;Name=RLG02443Zm00001d00001_NA_LTRsimilarity93.37 ID=Zm00001d010034;biotype=protein_coding;description=Zm00001d010034;gene_id=Zm00001d010034;logic_name=maker_gene -15082
ID=RLX21114Zm00001d00001;Name=RLX21114Zm00001d00001_NA_LTRsimilarity96.22 ID=Zm00001d010281;biotype=protein_coding;description=Zm00001d010281;gene_id=Zm00001d010281;logic_name=maker_gene 0
ID=DHH00464Zm00001d00002;Name=DHH00464Zm00001d00002_NA_LCV5p17_LCV3p5 ID=Zm00001d011980;biotype=protein_coding;description=Zm00001d011980;gene_id=Zm00001d011980;logic_name=maker_gene 29330
ID=RLX05880Zm00001d00001;Name=RLX05880Zm00001d00001_NA_LTRsimilarity97.96 ID=Zm00001d012363;biotype=protein_coding;description=Zm00001d012363;gene_id=Zm00001d012363;logic_name=maker_gene -8987
ID=DHH00002Zm00001d05263;Name=DHH00002Zm00001d05263_Hip1_LCV5p10_LCV3p50 ID=Zm00001d044969;biotype=protein_coding;description=Zm00001d044969;gene_id=Zm00001d044969;logic_name=maker_gene -1534
ID=RLX05797Zm00001d00001;Name=RLX05797Zm00001d00001_NA_LTRsimilarity92.41 ID=Zm00001d044990;biotype=protein_coding;description=Zm00001d044990;gene_id=Zm00001d044990;logic_name=maker_gene -2054
ID=RLX00579Zm00001d00002;Name=RLX00579Zm00001d00002_NA_LTRsimilarity89.33 ID=Zm00001d045057;biotype=protein_coding;description=Zm00001d045057;gene_id=Zm00001d045057;logic_name=maker_gene -1440
ID=RLC00002Zm00001d09421;Name=RLC00002Zm00001d09421_ji_LTRsimilarity93.33 ID=Zm00001d045057;biotype=protein_coding;description=Zm00001d045057;gene_id=Zm00001d045057;logic_name=maker_gene -2617
ID=RLC00002Zm00001d09429;Name=RLC00002Zm00001d09429_ji_LTRsimilarity89.6 ID=Zm00001d045082;biotype=protein_coding;description=Zm00001d045082;gene_id=Zm00001d045082;logic_name=maker_gene -68138
ID=RLG00204Zm00001d00010;Name=RLG00204Zm00001d00010_doke_LTRsimilarity89.1 ID=Zm00001d027057;biotype=lincRNA;gene_id=Zm00001d027057;logic_name=lncrna_gene 3338
ID=RLG00009Zm00001d01278;Name=RLG00009Zm00001d01278_gyma_LTRsimilarity91.59 ID=Zm00001d045793;biotype=protein_coding;description=Zm00001d045793;gene_id=Zm00001d045793;logic_name=maker_gene -34753
ID=DHH00001Zm00001d05797;Name=DHH00001Zm00001d05797_NA_LCV5p6_LCV3p10 ID=Zm00001d045803;biotype=protein_coding;description=Zm00001d045803;gene_id=Zm00001d045803;logic_name=maker_gene -19241
ID=RLG01049Zm00001d00004;Name=RLG01049Zm00001d00004_NA_LTRsimilarity85.57 ID=Zm00001d046331;biotype=protein_coding;description=Zm00001d046331;gene_id=Zm00001d046331;logic_name=maker_gene 0
ID=RLG00001Zm00001d12334;Name=RLG00001Zm00001d12334_cinful-zeon_LTRsimilarity85.19 ID=Zm00001d046395;biotype=protein_coding;description=Zm00001d046395;gene_id=Zm00001d046395;logic_name=maker_gene -47897
ID=RLG00003Zm00001d07748;Name=RLG00003Zm00001d07748_huck_LTRsimilarity92.63 ID=Zm00001d046395;biotype=protein_coding;description=Zm00001d046395;gene_id=Zm00001d046395;logic_name=maker_gene -3398
ID=RLC00183Zm00001dS0162;Name=RLC00183Zm00001dS0162_GCCCG ID=Zm00001d046395;biotype=protein_coding;description=Zm00001d046395;gene_id=Zm00001d046395;logic_name=maker_gene -10170
ID=RLX01838Zm00001d00003;Name=RLX01838Zm00001d00003_NA_LTRsimilarity87.95 ID=Zm00001d047193;biotype=protein_coding;description=Zm00001d047193;gene_id=Zm00001d047193;logic_name=maker_gene 2272
ID=RLX05140Zm00001d00001;Name=RLX05140Zm00001d00001_NA_LTRsimilarity98.39 ID=Zm00001d047247;biotype=protein_coding;description=Zm00001d047247;gene_id=Zm00001d047247;logic_name=maker_gene -582
ID=RIL00004Zm00001d00017;Name=RIL00004Zm00001d00017_nubo_TTCTCAAAA ID=Zm00001d027188;biotype=lincRNA;gene_id=Zm00001d027188;logic_name=lncrna_gene 0