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MechanicsProblem_Def.hpp
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MechanicsProblem_Def.hpp
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//*****************************************************************//
// Albany 3.0: Copyright 2016 Sandia Corporation //
// This Software is released under the BSD license detailed //
// in the file "license.txt" in the top-level Albany directory //
//*****************************************************************//
#include "Albany_Application.hpp"
#include "Albany_EvaluatorUtils.hpp"
#include "Albany_ProblemUtils.hpp"
#include "Albany_ResponseUtilities.hpp"
#include "Albany_STKDiscretization.hpp"
#include "Albany_Utils.hpp"
#include "PHAL_NSMaterialProperty.hpp"
#include "PHAL_ReadStateField.hpp"
#include "PHAL_SaveStateField.hpp"
#include "PHAL_Source.hpp"
#include "FieldNameMap.hpp"
#include "ACETemperatureResidual.hpp"
#include "AnalyticMassResidual.hpp"
#include "BodyForce.hpp"
#include "CurrentCoords.hpp"
#include "MechanicsResidual.hpp"
#include "MeshSizeField.hpp"
#include "SurfaceBasis.hpp"
#include "SurfaceScalarGradientOperatorHydroStress.hpp"
#include "SurfaceScalarGradientOperatorPorePressure.hpp"
#include "SurfaceScalarGradientOperatorTransport.hpp"
#include "SurfaceScalarJump.hpp"
#include "SurfaceVectorGradient.hpp"
#include "SurfaceVectorJump.hpp"
#include "SurfaceVectorResidual.hpp"
#include "Time.hpp"
// Constitutive Model Interface and parameters
#include "ConstitutiveModelInterface.hpp"
#include "ConstitutiveModelParameters.hpp"
#include "FirstPK.hpp"
#include "Kinematics.hpp"
// Generic Transport Residual
#include "TransportResidual.hpp"
// Thermomechanics specific evaluators
#include "ThermoMechanicalCoefficients.hpp"
// Poromechanics specific evaluators
#include "BiotCoefficient.hpp"
#include "BiotModulus.hpp"
#include "GradientElementLength.hpp"
#include "KCPermeability.hpp"
#include "Porosity.hpp"
#include "SurfaceTLPoroMassResidual.hpp"
#include "TLPoroPlasticityResidMass.hpp"
#include "TLPoroStress.hpp"
// Thermohydromechanics specific evaluators
#include "MixtureSpecificHeat.hpp"
#include "MixtureThermalExpansion.hpp"
#include "ThermoPoroPlasticityResidEnergy.hpp"
#include "ThermoPoroPlasticityResidMass.hpp"
// Hydrogen transport specific evaluators
#include "HDiffusionDeformationMatterResidual.hpp"
#include "LatticeDefGrad.hpp"
#include "ScalarL2ProjectionResidual.hpp"
#include "SurfaceHDiffusionDefResidual.hpp"
#include "SurfaceL2ProjectionResidual.hpp"
#include "TransportCoefficients.hpp"
// Helium bubble specific evaluators
#include "HeliumODEs.hpp"
// Damage equation specific evaluators
#include "DamageCoefficients.hpp"
// Damage equation specific evaluators
#include "StabilizedPressureResidual.hpp"
#ifdef ALBANY_CONTACT
// Contact evaluator
#include "PHAL_MortarContactResidual.hpp"
#endif
namespace Albany {
///
/// Public methods for MechanicsProblem class
///
Teuchos::Array<Teuchos::RCP<const PHX::FieldTag>>
MechanicsProblem::buildEvaluators(
PHX::FieldManager<PHAL::AlbanyTraits>& fm0,
MeshSpecsStruct const& meshSpecs,
StateManager& stateMgr,
FieldManagerChoice fmchoice,
Teuchos::RCP<Teuchos::ParameterList> const& responseList)
{
// Call constructeEvaluators<EvalT>(*rfm[0], *meshSpecs[0], stateMgr);
// for each EvalT in PHAL::AlbanyTraits::BEvalTypes
ConstructEvaluatorsOp<MechanicsProblem> op(
*this, fm0, meshSpecs, stateMgr, fmchoice, responseList);
Sacado::mpl::for_each<PHAL::AlbanyTraits::BEvalTypes> fe(op);
return *op.tags;
}
//
//
//
Teuchos::RCP<const Teuchos::ParameterList>
MechanicsProblem::getValidProblemParameters() const
{
Teuchos::RCP<Teuchos::ParameterList> validPL =
this->getGenericProblemParams("ValidMechanicsProblemParams");
validPL->set<bool>(
"Register dirichlet_field", true, "Flag to register dirichlet_field");
validPL->set<std::string>(
"MaterialDB Filename",
"materials.xml",
"Filename of material database xml file");
for (const std::string& variable : variables_problem_) {
validPL->sublist(variable, false, "");
}
for (const std::string& variable : variables_auxiliary_) {
validPL->sublist(variable, false, "");
}
return validPL;
}
//
//
//
template <typename EvalT>
Teuchos::RCP<const PHX::FieldTag>
MechanicsProblem::constructEvaluators(
PHX::FieldManager<PHAL::AlbanyTraits>& fm0,
MeshSpecsStruct const& meshSpecs,
StateManager& stateMgr,
FieldManagerChoice fieldManagerChoice,
Teuchos::RCP<Teuchos::ParameterList> const& responseList)
{
using Intrepid2Basis =
typename Teuchos::RCP<Intrepid2::Basis<PHX::Device, RealType, RealType>>;
// Collect problem-specific response parameters
Teuchos::RCP<Teuchos::ParameterList> pFromProb = Teuchos::rcp(
new Teuchos::ParameterList("Response Parameters from Problem"));
// get the name of the current element block
std::string const eb_name = meshSpecs.ebName;
std::string const matName =
material_db_->getElementBlockParam<std::string>(eb_name, "material");
Teuchos::ParameterList& param_list =
material_db_->getElementBlockSublist(eb_name, matName);
// get the name of the material model to be used (and make sure there is one)
std::string const material_model_name =
param_list.sublist("Material Model").get<std::string>("Model Name");
TEUCHOS_TEST_FOR_EXCEPTION(
material_model_name.length() == 0,
std::logic_error,
"A material model must be defined for block: " + eb_name);
#ifdef ALBANY_VERBOSE
*out << "In MechanicsProblem::constructEvaluators" << std::endl;
*out << "element block name: " << eb_name << std::endl;
*out << "material model name: " << material_model_name << std::endl;
#endif
// insert user-defined NOX Status Test for material models that use it
if (material_model_name == "CrystalPlasticity") {
Teuchos::RCP<NOX::StatusTest::ModelEvaluatorFlag> statusTest =
Teuchos::rcp_dynamic_cast<NOX::StatusTest::ModelEvaluatorFlag>(
nox_status_test_);
param_list.set<Teuchos::RCP<NOX::StatusTest::ModelEvaluatorFlag>>(
"NOX Status Test", statusTest);
}
// volume averaging flags
bool const volume_average_j = material_db_->getElementBlockParam<bool>(
eb_name, "Weighted Volume Average J", false);
bool const volume_average_pressure = material_db_->getElementBlockParam<bool>(
eb_name, "Volume Average Pressure", false);
RealType const volume_average_stabilization_param =
material_db_->getElementBlockParam<RealType>(
eb_name, "Average J Stabilization Parameter", 0.0);
// Check if we are setting the composite tet flag
composite_ = material_db_->getElementBlockParam<bool>(
eb_name, "Use Composite Tet 10", false);
pFromProb->set<bool>("Use Composite Tet 10", composite_);
// set flag for small strain option
bool small_strain =
material_model_name == "Linear Elastic" ||
material_model_name == "Linear Elastic Volumetric Deviatoric";
if (material_db_->isElementBlockParam(eb_name, "Strain Flag")) {
small_strain = true;
}
// Surface element checking
bool const surface_element = material_db_->getElementBlockParam<bool>(
eb_name, "Surface Element", false);
bool const cohesive_element = material_db_->getElementBlockParam<bool>(
eb_name, "Cohesive Element", false);
RealType thickness{0.0};
if (surface_element) {
thickness = material_db_->getElementBlockParam<RealType>(
eb_name, "Localization thickness parameter", 0.1);
}
bool const compute_membrane_forces = material_db_->getElementBlockParam<bool>(
eb_name, "Compute Membrane Forces", false);
// FIXME: really need to check for WEDGE_12 topologies
TEUCHOS_TEST_FOR_EXCEPTION(
composite_ && surface_element,
std::logic_error,
"Surface elements are not yet supported with the composite tet");
// Get the intrepid basis for the given cell topology
Intrepid2Basis intrepidBasis = getIntrepid2Basis(meshSpecs.ctd, composite_);
// define cell topologies
Teuchos::RCP<shards::CellTopology> const cellType =
Teuchos::rcp(new shards::CellTopology(
composite_ && meshSpecs.ctd.dimension == 3 &&
meshSpecs.ctd.node_count == 10 ?
shards::getCellTopologyData<shards::Tetrahedron<11>>() :
&meshSpecs.ctd));
Intrepid2::DefaultCubatureFactory cubFactory;
Teuchos::RCP<Intrepid2::Cubature<PHX::Device>> cubature =
cubFactory.create<PHX::Device, RealType, RealType>(
*cellType, meshSpecs.cubatureDegree);
if (composite_) {
ALBANY_ASSERT(
meshSpecs.cubatureDegree < 4,
"\n Cannot use Composite Tet 10 elements + Cubature Degree > 3! You "
"have "
<< " specified Cubature Degree = " << meshSpecs.cubatureDegree
<< ".\n");
}
// TODO: this could probably go into the ProblemUtils
// just like the call to getIntrepid2Basis
Intrepid2Basis surfaceBasis;
Teuchos::RCP<shards::CellTopology> surfaceTopology;
Teuchos::RCP<Intrepid2::Cubature<PHX::Device>> surfaceCubature;
if (surface_element == true) {
#ifdef ALBANY_VERBOSE
*out << "In Surface Element Logic" << std::endl;
#endif
std::string name = meshSpecs.ctd.name;
if (name == "Triangle_3" || name == "Quadrilateral_4") {
surfaceBasis =
Teuchos::rcp(new Intrepid2::Basis_HGRAD_LINE_C1_FEM<PHX::Device>());
surfaceTopology = Teuchos::rcp(new shards::CellTopology(
shards::getCellTopologyData<shards::Line<2>>()));
surfaceCubature = cubFactory.create<PHX::Device>(
*surfaceTopology, meshSpecs.cubatureDegree);
} else if (name == "Wedge_6") {
surfaceBasis =
Teuchos::rcp(new Intrepid2::Basis_HGRAD_TRI_C1_FEM<PHX::Device>());
surfaceTopology = Teuchos::rcp(new shards::CellTopology(
shards::getCellTopologyData<shards::Triangle<3>>()));
surfaceCubature = cubFactory.create<PHX::Device>(
*surfaceTopology, meshSpecs.cubatureDegree);
} else if (name == "Hexahedron_8") {
surfaceBasis =
Teuchos::rcp(new Intrepid2::Basis_HGRAD_QUAD_C1_FEM<PHX::Device>());
surfaceTopology = Teuchos::rcp(new shards::CellTopology(
shards::getCellTopologyData<shards::Quadrilateral<4>>()));
surfaceCubature = cubFactory.create<PHX::Device>(
*surfaceTopology, meshSpecs.cubatureDegree);
}
#ifdef ALBANY_VERBOSE
*out << "surfaceCubature->getNumPoints(): "
<< surfaceCubature->getNumPoints() << std::endl;
*out << "surfaceCubature->getDimension(): "
<< surfaceCubature->getDimension() << std::endl;
#endif
}
// Note that these are the volume element quantities
num_nodes_ = intrepidBasis->getCardinality();
int const workset_size = meshSpecs.worksetSize;
#ifdef ALBANY_VERBOSE
*out << "Setting num_pts_, surface element is " << surface_element
<< std::endl;
#endif
num_dims_ = cubature->getDimension();
if (surface_element == false) {
num_pts_ = cubature->getNumPoints();
} else {
num_pts_ = surfaceCubature->getNumPoints();
}
num_vertices_ = num_nodes_;
#ifdef ALBANY_VERBOSE
*out << "Field Dimensions: Workset=" << workset_size
<< ", Vertices= " << num_vertices_ << ", Nodes= " << num_nodes_
<< ", QuadPts= " << num_pts_ << ", Dim= " << num_dims_ << std::endl;
#endif
// Construct standard FEM evaluators with standard field names
dl_ = Teuchos::rcp(new Layouts(
workset_size, num_vertices_, num_nodes_, num_pts_, num_dims_));
TEUCHOS_TEST_FOR_EXCEPTION(
dl_->vectorAndGradientLayoutsAreEquivalent == false,
std::logic_error,
"Data Layout Usage in Mechanics problems assume vecDim = num_dims_");
EvaluatorUtils<EvalT, PHAL::AlbanyTraits> evalUtils(dl_);
int offset{0};
// Temporary variable used numerous times below
Teuchos::RCP<PHX::Evaluator<PHAL::AlbanyTraits>> ev;
// Have to register Lattice_Orientation in the mesh before the discretization
// is built
auto find_orientation = std::find(
this->requirements.begin(),
this->requirements.end(),
"Lattice_Orientation");
if (find_orientation != this->requirements.end()) {
auto entity = StateStruct::ElemData;
stateMgr.registerStateVariable(
"Lattice_Orientation",
dl_->cell_tensor,
meshSpecs.ebName,
false,
&entity);
}
// Have to register boundary_indicator in the mesh before the discretization
// is built
auto find_boundary_indicator = std::find(
this->requirements.begin(),
this->requirements.end(),
"boundary_indicator");
if (find_boundary_indicator != this->requirements.end()) {
auto entity = StateStruct::ElemData;
stateMgr.registerStateVariable(
"boundary_indicator",
dl_->cell_scalar,
meshSpecs.ebName,
false,
&entity);
}
// Define Field Names
// generate the field name map to deal with outputing surface element info
LCM::FieldNameMap field_name_map(surface_element);
Teuchos::RCP<std::map<std::string, std::string>> fnm_rcp =
field_name_map.getMap();
auto fnm = (*fnm_rcp);
std::string cauchy = fnm["Cauchy_Stress"];
std::string firstPK = fnm["FirstPK"];
std::string Fp = fnm["Fp"];
std::string eqps = fnm["eqps"];
std::string temperature = fnm["Temperature"];
std::string ace_temperature = fnm["ACE Temperature"];
std::string pressure = fnm["Pressure"];
std::string mech_source = fnm["Mechanical_Source"];
std::string defgrad = fnm["F"];
std::string J = fnm["J"];
// Poromechanics variables
std::string totStress = fnm["Total_Stress"];
std::string kcPerm = fnm["KCPermeability"];
std::string biotModulus = fnm["Biot_Modulus"];
std::string biotCoeff = fnm["Biot_Coefficient"];
std::string porosity = fnm["Porosity"];
std::string porePressure = fnm["Pore_Pressure"];
// Hydrogen diffusion variable
std::string transport = fnm["Transport"];
std::string hydroStress = fnm["HydroStress"];
std::string diffusionCoefficient = fnm["Diffusion_Coefficient"];
std::string convectionCoefficient = fnm["Tau_Contribution"];
std::string trappedConcentration = fnm["Trapped_Concentration"];
std::string totalConcentration = fnm["Total_Concentration"];
std::string effectiveDiffusivity = fnm["Effective_Diffusivity"];
std::string trappedSolvent = fnm["Trapped_Solvent"];
std::string strainRateFactor = fnm["Strain_Rate_Factor"];
std::string equilibrium_param = fnm["Concentration_Equilibrium_Parameter"];
std::string gradient_element_length = fnm["Gradient_Element_Length"];
// Helium bubble evolution
std::string he_concentration = fnm["He_Concentration"];
std::string total_bubble_density = fnm["Total_Bubble_Density"];
std::string bubble_volume_fraction = fnm["Bubble_Volume_Fraction"];
// Get the solution method type
SolutionMethodType SolutionType = getSolutionMethod();
TEUCHOS_TEST_FOR_EXCEPTION(
SolutionType == SolutionMethodType::Unknown,
std::logic_error,
"Solution Method must be Steady, Transient, "
"Continuation, Eigensolve, or Aeras Hyperviscosity");
if (have_mech_eq_ == true) {
Teuchos::ArrayRCP<std::string> const dof_names(1, "Displacement");
Teuchos::ArrayRCP<std::string> const dof_names_dot(1, "Velocity");
Teuchos::ArrayRCP<std::string> const dof_names_dotdot(1, "Acceleration");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_withAcceleration(
true, dof_names, dof_names_dot, dof_names_dotdot));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherCoordinateVectorEvaluator());
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFVecInterpolationEvaluator(dof_names[0]));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFVecInterpolationEvaluator(dof_names_dot[0]));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFVecInterpolationEvaluator(dof_names_dotdot[0]));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFVecGradInterpolationEvaluator(dof_names[0]));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFVecGradInterpolationEvaluator(
dof_names_dot[0]));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructMapToPhysicalFrameEvaluator(cellType, cubature));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructComputeBasisFunctionsEvaluator(
cellType, intrepidBasis, cubature));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(true, resid_names));
#ifdef ALBANY_CONTACT
fm0.template registerEvaluator<EvalT>(
evalUtils.constructMortarContactResidualEvaluator(resid_names));
#endif
offset += num_dims_;
} else if (have_mech_ == true) { // constant configuration
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList);
p->set<std::string>("Material Property Name", "Displacement");
p->set<Teuchos::RCP<PHX::DataLayout>>("Data Layout", dl_->qp_vector);
p->set<std::string>("Coordinate Vector Name", "Coord Vec");
p->set<Teuchos::RCP<PHX::DataLayout>>(
"Coordinate Vector Data Layout", dl_->qp_vector);
p->set<Teuchos::RCP<ParamLib>>("Parameter Library", paramLib);
Teuchos::ParameterList& paramList = params->sublist("Displacement");
p->set<Teuchos::ParameterList*>("Parameter List", ¶mList);
ev = Teuchos::rcp(
new PHAL::NSMaterialProperty<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
// Output the Velocity and Acceleration
// Register the states to store the output data in
// store computed xdot in "Velocity" field
// This is just for testing as it duplicates writing the solution
pFromProb->set<std::string>("x Field Name", "xField");
// store computed xdot in "Velocity" field
pFromProb->set<std::string>("xdot Field Name", "Velocity");
// store computed xdotdot in "Acceleration" field
pFromProb->set<std::string>("xdotdot Field Name", "Acceleration");
if (have_temperature_eq_ == true) { // Gather Solution Temperature
Teuchos::ArrayRCP<std::string> const dof_names(1, "Temperature");
Teuchos::ArrayRCP<std::string> const dof_names_dot(1, "Temperature Dot");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
if (SolutionType == SolutionMethodType::Transient) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_withAcceleration(
false, dof_names, dof_names_dot, Teuchos::null, offset));
} else {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
}
if (have_mech_eq_ == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherCoordinateVectorEvaluator());
}
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
if (SolutionType == SolutionMethodType::Transient) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(
dof_names_dot[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
if (have_mech_eq_ == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructComputeBasisFunctionsEvaluator(
cellType, intrepidBasis, cubature));
}
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter Temperature"));
offset++;
} else if (
(!have_temperature_eq_ && have_temperature_) || have_transport_eq_ ||
have_transport_) {
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList);
p->set<std::string>("Material Property Name", temperature);
p->set<Teuchos::RCP<PHX::DataLayout>>("Data Layout", dl_->qp_scalar);
p->set<std::string>("Coordinate Vector Name", "Coord Vec");
p->set<Teuchos::RCP<PHX::DataLayout>>(
"Coordinate Vector Data Layout", dl_->qp_vector);
p->set<Teuchos::RCP<ParamLib>>("Parameter Library", paramLib);
Teuchos::ParameterList& paramList = params->sublist("Temperature");
// This evaluator is called to set a constant temperature when
// "Variable Type" is set to "Constant." It is also called when
// "Variable Type" is set to "Time Dependent." There are two "Type"
// variables in the PL - "Type" and "Variable Type". For the last case,
// let's set "Type" to "Time Dependent" to hopefully make the evaluator call
// a little more general (GAH)
std::string const temp_type =
paramList.get<std::string>("Variable Type", "None");
if (temp_type == "Time Dependent") {
paramList.set<std::string>("Type", temp_type);
}
p->set<Teuchos::ParameterList*>("Parameter List", ¶mList);
ev = Teuchos::rcp(
new PHAL::NSMaterialProperty<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if (have_ace_temperature_eq_ == true) { // Gather Solution ACE Temperature
Teuchos::ArrayRCP<std::string> const dof_names(1, "ACE Temperature");
Teuchos::ArrayRCP<std::string> const dof_names_dot(
1, "ACE Temperature Dot");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
if (SolutionType == SolutionMethodType::Transient) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_withAcceleration(
false, dof_names, dof_names_dot, Teuchos::null, offset));
} else {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
}
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
if (SolutionType == SolutionMethodType::Transient) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(
dof_names_dot[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter ACE Temperature"));
offset++;
}
if (have_stab_pressure_eq_ == true) { // Gather Stabilized Pressure
Teuchos::ArrayRCP<std::string> dof_names(1, "Pressure");
Teuchos::ArrayRCP<std::string> resid_names(1, dof_names[0] + " Residual");
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter Pressure"));
offset++;
}
if (have_damage_eq_ == true) { // Damage
Teuchos::ArrayRCP<std::string> const dof_names(1, "Damage");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter Damage"));
offset++;
} else if ((have_damage_eq_ == false) && (have_damage_ == true)) {
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList);
p->set<std::string>("Material Property Name", "Damage");
p->set<Teuchos::RCP<PHX::DataLayout>>("Data Layout", dl_->qp_scalar);
p->set<std::string>("Coordinate Vector Name", "Coord Vec");
p->set<Teuchos::RCP<PHX::DataLayout>>(
"Coordinate Vector Data Layout", dl_->qp_vector);
p->set<Teuchos::RCP<ParamLib>>("Parameter Library", paramLib);
Teuchos::ParameterList& paramList = params->sublist("Damage");
p->set<Teuchos::ParameterList*>("Parameter List", ¶mList);
ev = Teuchos::rcp(
new PHAL::NSMaterialProperty<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if (have_pore_pressure_eq_ == true) {
Teuchos::ArrayRCP<std::string> const dof_names(1, "Pore_Pressure");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter Pore_Pressure"));
offset++;
} else if (have_pore_pressure_ == true) { // constant Pressure
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList);
p->set<std::string>("Material Property Name", "Pressure");
p->set<Teuchos::RCP<PHX::DataLayout>>("Data Layout", dl_->qp_scalar);
p->set<std::string>("Coordinate Vector Name", "Coord Vec");
p->set<Teuchos::RCP<PHX::DataLayout>>(
"Coordinate Vector Data Layout", dl_->qp_vector);
p->set<Teuchos::RCP<ParamLib>>("Parameter Library", paramLib);
Teuchos::ParameterList& paramList = params->sublist("Pressure");
p->set<Teuchos::ParameterList*>("Parameter List", ¶mList);
ev = Teuchos::rcp(
new PHAL::NSMaterialProperty<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if (have_transport_eq_ == true) { // Gather solution for transport problem
// Lattice Concentration
Teuchos::ArrayRCP<std::string> const dof_names(1, "Transport");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter Transport"));
offset++; // for lattice concentration
} else if (have_transport_ == true) { // Constant transport scalar value
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList);
p->set<std::string>("Material Property Name", "Transport");
p->set<Teuchos::RCP<PHX::DataLayout>>("Data Layout", dl_->qp_scalar);
p->set<std::string>("Coordinate Vector Name", "Coord Vec");
p->set<Teuchos::RCP<PHX::DataLayout>>(
"Coordinate Vector Data Layout", dl_->qp_vector);
p->set<Teuchos::RCP<ParamLib>>("Parameter Library", paramLib);
Teuchos::ParameterList& paramList = params->sublist("Transport");
p->set<Teuchos::ParameterList*>("Parameter List", ¶mList);
ev = Teuchos::rcp(
new PHAL::NSMaterialProperty<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if (have_hydrostress_eq_ == true) { // Gather solution for transport problem
Teuchos::ArrayRCP<std::string> const dof_names(1, "HydroStress");
Teuchos::ArrayRCP<std::string> const resid_names(
1, dof_names[0] + " Residual");
fm0.template registerEvaluator<EvalT>(
evalUtils.constructGatherSolutionEvaluator_noTransient(
false, dof_names, offset));
if (surface_element == false) {
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFInterpolationEvaluator(dof_names[0], offset));
fm0.template registerEvaluator<EvalT>(
evalUtils.constructDOFGradInterpolationEvaluator(
dof_names[0], offset));
}
fm0.template registerEvaluator<EvalT>(
evalUtils.constructScatterResidualEvaluator(
false, resid_names, offset, "Scatter HydroStress"));
offset++; // for hydrostatic stress
}
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList("Time"));
p->set<std::string>("Time Name", "Time");
p->set<std::string>("Delta Time Name", "Delta Time");
p->set<Teuchos::RCP<PHX::DataLayout>>(
"Workset Scalar Data Layout", dl_->workset_scalar);
p->set<Teuchos::RCP<ParamLib>>("Parameter Library", paramLib);
p->set<bool>("Disable Transient", true);
ev = Teuchos::rcp(new LCM::Time<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
p = stateMgr.registerStateVariable(
"Time", dl_->workset_scalar, dl_->dummy, eb_name, "scalar", 0.0, true);
ev = Teuchos::rcp(new PHAL::SaveStateField<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
bool reg_dir_field{false};
if (params->isParameter("Register dirichlet_field")) {
reg_dir_field = params->get<bool>("Register dirichlet_field");
}
// IKT, 3/27/16: register dirichlet_field for specifying Dirichlet data from a
// field
// in the input exodus mesh, if this is requested in the input file .
if ((dir_count == 0) && (reg_dir_field == true)) {
// constructEvaluators gets called multiple times for different
// specializations.
// Make sure dirichlet_field gets registered only once via counter.
// I don't quite understand why this is needed for LCM but not for
// LANDICE... dirichlet_field
StateStruct::MeshFieldEntity entity = StateStruct::NodalDistParameter;
stateMgr.registerStateVariable(
"dirichlet_field", dl_->node_vector, eb_name, true, &entity, "");
dir_count++;
}
if (have_mech_eq_ == true) { // Current Coordinates
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList("Current Coordinates"));
p->set<std::string>("Reference Coordinates Name", "Coord Vec");
p->set<std::string>("Displacement Name", "Displacement");
p->set<std::string>("Current Coordinates Name", "Current Coordinates");
ev = Teuchos::rcp(
new LCM::CurrentCoords<EvalT, PHAL::AlbanyTraits>(*p, dl_));
fm0.template registerEvaluator<EvalT>(ev);
}
if ((have_mech_eq_ == true) && (have_sizefield_adaptation_ == true)) {
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList("Isotropic Mesh Size Field"));
p->set<std::string>("IsoTropic MeshSizeField Name", "IsoMeshSizeField");
p->set<std::string>("Current Coordinates Name", "Current Coordinates");
p->set<Teuchos::RCP<Intrepid2::Cubature<PHX::Device>>>(
"Cubature", cubature);
// Get the Adaptation list and send to the evaluator
Teuchos::ParameterList& paramList = params->sublist("Adaptation");
p->set<Teuchos::ParameterList*>("Parameter List", ¶mList);
p->set<const Intrepid2Basis>("Intrepid2 Basis", intrepidBasis);
ev = Teuchos::rcp(
new LCM::IsoMeshSizeField<EvalT, PHAL::AlbanyTraits>(*p, dl_));
fm0.template registerEvaluator<EvalT>(ev);
bool output_flag{true};
p = stateMgr.registerStateVariable(
"IsoMeshSizeField",
dl_->qp_scalar,
dl_->dummy,
eb_name,
"scalar",
1.0,
true,
output_flag);
ev = Teuchos::rcp(new PHAL::SaveStateField<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if ((have_temperature_eq_ == true) || (have_temperature_ == true)) {
RealType const temp = material_db_->getElementBlockParam<RealType>(
eb_name, "Initial Temperature", 0.0);
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList("Save Temperature"));
p = stateMgr.registerStateVariable(
temperature,
dl_->qp_scalar,
dl_->dummy,
eb_name,
"scalar",
temp,
true,
true);
ev = Teuchos::rcp(new PHAL::SaveStateField<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if ((have_ace_temperature_eq_ == true) || (have_ace_temperature_ == true)) {
RealType const temp = material_db_->getElementBlockParam<RealType>(
eb_name, "Initial ACE Temperature", 0.0);
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList("Save ACE Temperature"));
p = stateMgr.registerStateVariable(
ace_temperature,
dl_->qp_scalar,
dl_->dummy,
eb_name,
"scalar",
temp,
true,
true);
ev = Teuchos::rcp(new PHAL::SaveStateField<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if ((have_pore_pressure_eq_ == true) || (have_pore_pressure_ == true)) {
Teuchos::RCP<Teuchos::ParameterList> p =
Teuchos::rcp(new Teuchos::ParameterList("Save Pore Pressure"));
p = stateMgr.registerStateVariable(
porePressure,
dl_->qp_scalar,
dl_->dummy,
eb_name,
"scalar",
0.0,
true,
false);
ev = Teuchos::rcp(new PHAL::SaveStateField<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if ((have_transport_eq_ == true) || (have_transport_ == true)) {
bool const output_flag = material_db_->getElementBlockParam<bool>(
eb_name, "Output IP" + transport, true);
RealType const ic = material_db_->getElementBlockParam<double>(
eb_name, "Initial Concentration", 0.0);
Teuchos::RCP<Teuchos::ParameterList> const p =
stateMgr.registerStateVariable(
transport,
dl_->qp_scalar,
dl_->dummy,
eb_name,
"scalar",
ic,
true,
output_flag);
ev = Teuchos::rcp(new PHAL::SaveStateField<EvalT, PHAL::AlbanyTraits>(*p));
fm0.template registerEvaluator<EvalT>(ev);
}
if ((have_hydrostress_eq_ == true) || (have_hydrostress_ == true)) {