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BiocParallel error in Simulate spot-resolution spatial data for cell-type deconvolution #30

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RadishTheVeggie opened this issue Feb 22, 2024 · 1 comment

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@RadishTheVeggie
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Hi,
I ran into the a BiocParallel error when trying to replicate the code in https://songdongyuan1994.github.io/scDesign3/docs/articles/scDesign3-spatial-deconvolution.html.

image

All the code is the same as in the github Simulate spot-resolution spatial data for cell-type deconvolution article but does not seem to be working.

Thanks.

@SONGDONGYUAN1994
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@RadishTheVeggie Sorry for the late reply. May I ask your system for running this job? You can set ncore = 1 to see if it works. There are other options for Parallel computing, which you may have a try.

Best,
Dongyuan

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