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parameters.h
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parameters.h
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/*
* Copyright (C) 2020-2024 MEmilio
*
* Authors: Daniel Abele, Elisabeth Kluth, Khoa Nguyen
*
* Contact: Martin J. Kuehn <Martin.Kuehn@DLR.de>
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
#ifndef MIO_ABM_PARAMETERS_H
#define MIO_ABM_PARAMETERS_H
#include "abm/mask_type.h"
#include "abm/time.h"
#include "abm/virus_variant.h"
#include "abm/vaccine.h"
#include "memilio/config.h"
#include "memilio/io/auto_serialize.h"
#include "memilio/io/io.h"
#include "memilio/math/interpolation.h"
#include "memilio/utils/custom_index_array.h"
#include "memilio/utils/uncertain_value.h"
#include "memilio/utils/parameter_set.h"
#include "memilio/epidemiology/age_group.h"
#include "memilio/epidemiology/damping.h"
#include "memilio/epidemiology/contact_matrix.h"
#include <algorithm>
#include <cassert>
#include <limits>
#include <utility>
#include <vector>
namespace mio
{
template <class IOContext>
void serialize_internal(IOContext& io, const UniformDistribution<double>::ParamType& p)
{
auto obj = io.create_object("UniformDistributionParams");
obj.add_element("a", p.params.a());
obj.add_element("b", p.params.b());
}
template <class IOContext>
IOResult<UniformDistribution<double>::ParamType> deserialize_internal(IOContext& io,
Tag<UniformDistribution<double>::ParamType>)
{
auto obj = io.expect_object("UniformDistributionParams");
auto a = obj.expect_element("a", Tag<double>{});
auto b = obj.expect_element("b", Tag<double>{});
return apply(
io,
[](auto&& a_, auto&& b_) {
return UniformDistribution<double>::ParamType{a_, b_};
},
a, b);
}
namespace abm
{
/**
* @brief Time that a Person is infected but not yet infectious.
*/
struct IncubationPeriod {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "IncubationPeriod";
}
};
struct InfectedNoSymptomsToSymptoms {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "InfectedNoSymptomsToSymptoms";
}
};
struct InfectedNoSymptomsToRecovered {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "InfectedNoSymptomsToRecovered";
}
};
struct InfectedSymptomsToRecovered {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "InfectedSymptomsToRecovered";
}
};
struct InfectedSymptomsToSevere {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "InfectedSymptomsToSevere";
}
};
struct SevereToCritical {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "SevereToCritical";
}
};
struct SevereToRecovered {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "SevereToRecovered";
}
};
struct CriticalToRecovered {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "CriticalToRecovered";
}
};
struct CriticalToDead {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "CriticalToDead";
}
};
struct RecoveredToSusceptible {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "RecoveredToSusceptible";
}
};
/**
* @brief Parameters for the ViralLoad course. Default values taken as constant values from the average from
* https://github.com/VirologyCharite/SARS-CoV-2-VL-paper/tree/main
* Section 3.3.1 or see also supplementary materials Fig. S5.
*/
struct ViralLoadDistributionsParameters {
UniformDistribution<double>::ParamType viral_load_peak;
UniformDistribution<double>::ParamType viral_load_incline;
UniformDistribution<double>::ParamType viral_load_decline;
auto auto_serialize()
{
return make_auto_serialization("ViralLoadDistributionsParameters", NVP("viral_load_peak", viral_load_peak),
NVP("viral_load_incline", viral_load_incline),
NVP("viral_load_decline", viral_load_decline));
}
};
struct ViralLoadDistributions {
using Type = CustomIndexArray<ViralLoadDistributionsParameters, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
Type default_val({VirusVariant::Count, size},
ViralLoadDistributionsParameters{{8.1, 8.1}, {2., 2.}, {-0.17, -0.17}});
return default_val;
}
static std::string name()
{
return "ViralLoadDistributions";
}
};
/**
* @brief Parameters for the Infectivity. Default values taken as constant values that match the graph 2C from
* https://github.com/VirologyCharite/SARS-CoV-2-VL-paper/tree/main
*/
struct InfectivityDistributionsParameters {
UniformDistribution<double>::ParamType infectivity_alpha;
UniformDistribution<double>::ParamType infectivity_beta;
auto auto_serialize()
{
return make_auto_serialization("InfectivityDistributionsParameters",
NVP("infectivity_alpha", infectivity_alpha),
NVP("infectivity_beta", infectivity_beta));
}
};
struct InfectivityDistributions {
using Type = CustomIndexArray<InfectivityDistributionsParameters, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
Type default_val({VirusVariant::Count, size}, InfectivityDistributionsParameters{{-7., -7.}, {1., 1.}});
return default_val;
}
static std::string name()
{
return "InfectivityDistributions";
}
};
/**
* @brief Probability that an Infection is detected.
*/
struct DetectInfection {
using Type = CustomIndexArray<UncertainValue<>, VirusVariant, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({VirusVariant::Count, size}, 1.);
}
static std::string name()
{
return "DetectInfection";
}
};
/**
* @brief Effectiveness of a Mask of a certain MaskType% against an Infection%.
*/
struct MaskProtection {
using Type = CustomIndexArray<UncertainValue<>, MaskType>;
static Type get_default(AgeGroup /*size*/)
{
return Type({MaskType::Count}, 1.);
}
static std::string name()
{
return "MaskProtection";
}
};
/**
* @brief Aerosol transmission rates.
*/
struct AerosolTransmissionRates {
using Type = CustomIndexArray<ScalarType, VirusVariant>;
static Type get_default(AgeGroup /*size*/)
{
return Type({VirusVariant::Count}, 1.0);
}
static std::string name()
{
return "AerosolTransmissionRates";
}
};
class TimeDependentParameterFunctor
{
public:
enum class Type
{
Zero,
LinearInterpolation,
};
using DataType = std::vector<std::vector<ScalarType>>;
TimeDependentParameterFunctor(Type type, DataType data)
: m_type(type)
, m_data(data)
{
// data preprocessing
switch (m_type) {
case Type::Zero:
// no preprocessing needed
break;
case Type::LinearInterpolation:
// make sure data has the correct shape, i.e. a list of (time, value) pairs
assert(m_data.size() > 0);
assert(std::all_of(m_data.begin(), m_data.end(), [](auto&& a) {
return a.size() == 2;
}));
// sort by time
std::sort(m_data.begin(), m_data.end(), [](auto&& a, auto&& b) {
return a[0] < b[0];
});
}
}
TimeDependentParameterFunctor()
: TimeDependentParameterFunctor(Type::Zero, {})
{
}
ScalarType operator()(ScalarType time) const
{
switch (m_type) {
case Type::Zero:
return 0.0;
case Type::LinearInterpolation:
// find next time point in m_data (strictly) after time
const auto next_tp = std::upper_bound(m_data.begin(), m_data.end(), time, [](auto&& t, auto&& tp) {
return t < tp[0];
});
if (next_tp == m_data.begin()) { // time is before first data point
return m_data.front()[1];
}
if (next_tp == m_data.end()) { // time is past last data point
return m_data.back()[1];
}
const auto tp = next_tp - 1;
return linear_interpolation(time, (*tp)[0], (*next_tp)[0], (*tp)[1], (*next_tp)[1]);
}
return 0.0; // should be unreachable, but without this the compiler may complain about a missing return.
}
auto auto_serialize()
{
return make_auto_serialization("TimeDependentParameterFunctor", NVP("type", m_type), NVP("data", m_data));
}
private:
Type m_type;
DataType m_data;
};
// using InputFunctionForProtectionLevel = std::function<ScalarType(ScalarType)>;
using InputFunctionForProtectionLevel = TimeDependentParameterFunctor;
/**
* @brief Personal protection factor against #Infection% after #Infection and #Vaccination, which depends on #ExposureType,
* #AgeGroup and #VirusVariant. Its value is between 0 and 1.
*/
struct InfectionProtectionFactor {
using Type = CustomIndexArray<InputFunctionForProtectionLevel, ExposureType, AgeGroup, VirusVariant>;
static auto get_default(AgeGroup size)
{
return Type({ExposureType::Count, size, VirusVariant::Count},
Type::value_type(TimeDependentParameterFunctor::Type::Zero, {}));
}
static std::string name()
{
return "InfectionProtectionFactor";
}
};
/**
* @brief Personal protective factor against severe symptoms after #Infection and #Vaccination, which depends on #ExposureType,
* #AgeGroup and #VirusVariant. Its value is between 0 and 1.
*/
struct SeverityProtectionFactor {
using Type = CustomIndexArray<InputFunctionForProtectionLevel, ExposureType, AgeGroup, VirusVariant>;
static auto get_default(AgeGroup size)
{
return Type({ExposureType::Count, size, VirusVariant::Count},
Type::value_type(TimeDependentParameterFunctor::Type::Zero, {}));
}
static std::string name()
{
return "SeverityProtectionFactor";
}
};
/**
* @brief Personal protective factor against high viral load. Its value is between 0 and 1.
*/
struct HighViralLoadProtectionFactor {
using Type = InputFunctionForProtectionLevel;
static auto get_default()
{
return Type(TimeDependentParameterFunctor::Type::Zero, {});
}
static std::string name()
{
return "HighViralLoadProtectionFactor";
}
};
/**
* @brief Parameters that describe the reliability of a test.
*/
struct TestParameters {
UncertainValue<> sensitivity;
UncertainValue<> specificity;
auto auto_serialize()
{
return make_auto_serialization("TestParameters", NVP("sensitivity", sensitivity),
NVP("specificity", specificity));
}
};
struct GenericTest {
using Type = TestParameters;
static Type get_default()
{
return Type{0.9, 0.99};
}
static std::string name()
{
return "GenericTest";
}
};
/**
* @brief Reliability of an AntigenTest.
*/
struct AntigenTest : public GenericTest {
using Type = TestParameters;
static Type get_default()
{
return Type{0.8, 0.88};
}
static std::string name()
{
return "AntigenTest";
}
};
/**
* @brief Reliability of a PCRTest.
*/
struct PCRTest : public GenericTest {
using Type = TestParameters;
static Type get_default()
{
return Type{0.9, 0.99};
}
static std::string name()
{
return "PCRTest";
}
};
/**
* @brief Starting date of interventions.
*/
struct LockdownDate {
using Type = TimePoint;
static auto get_default(AgeGroup /*size*/)
{
return TimePoint(std::numeric_limits<int>::max());
}
static std::string name()
{
return "LockdownDate";
}
};
/**
* @brief Duration of quarantine.
*/
struct QuarantineDuration {
using Type = TimeSpan;
static auto get_default(AgeGroup /*size*/)
{
return days(10);
}
static std::string name()
{
return "QuarantineDuration";
}
};
/**
* @brief Parameter for the exponential distribution to decide if a Person goes shopping.
*/
struct BasicShoppingRate {
using Type = CustomIndexArray<UncertainValue<>, AgeGroup>;
static auto get_default(AgeGroup size)
{
return Type({size}, 1.0);
}
static std::string name()
{
return "BasicShoppingRate";
}
};
/**
* @brief Percentage of Person%s of the respective age going to work.
*/
struct WorkRatio {
using Type = DampingMatrixExpression<Dampings<Damping<ColumnVectorShape>>>;
static auto get_default(AgeGroup /*size*/)
{
return Type(Eigen::VectorXd::Constant(1, 1.0));
}
static std::string name()
{
return "WorkRatio";
}
};
/**
* @brief Percentage of Person%s of the respective age going to school.
*/
struct SchoolRatio {
using Type = DampingMatrixExpression<Dampings<Damping<ColumnVectorShape>>>;
static auto get_default(AgeGroup /*size*/)
{
return Type(Eigen::VectorXd::Constant(1, 1.0));
}
static std::string name()
{
return "SchoolRatio";
}
};
/**
* @brief Parameter for the exponential distribution to decide if a Person goes to a social event.
*/
struct SocialEventRate {
using Type = DampingMatrixExpression<Dampings<Damping<ColumnVectorShape>>>;
static auto get_default(AgeGroup size)
{
return Type(Eigen::VectorXd::Constant((size_t)size, 1.0));
}
static std::string name()
{
return "SocialEventRate";
}
};
/**
* @brief Earliest time that a Person can go to work.
*/
struct GotoWorkTimeMinimum {
using Type = CustomIndexArray<TimeSpan, AgeGroup>;
static auto get_default(AgeGroup size)
{
return CustomIndexArray<TimeSpan, AgeGroup>(size, hours(6));
}
static std::string name()
{
return "GotoWorkTimeMinimum";
}
};
/**
* @brief Latest time that a Person can go to work.
*/
struct GotoWorkTimeMaximum {
using Type = CustomIndexArray<TimeSpan, AgeGroup>;
static auto get_default(AgeGroup size)
{
return CustomIndexArray<TimeSpan, AgeGroup>(size, hours(9));
}
static std::string name()
{
return "GotoWorkTimeMaximum";
}
};
/**
* @brief Earliest time that a Person can go to school.
*/
struct GotoSchoolTimeMinimum {
using Type = CustomIndexArray<TimeSpan, AgeGroup>;
static auto get_default(AgeGroup size)
{
return CustomIndexArray<TimeSpan, AgeGroup>(size, hours(6));
}
static std::string name()
{
return "GotoSchoolTimeMinimum";
}
};
/**
* @brief Latest time that a Person can go to school.
*/
struct GotoSchoolTimeMaximum {
using Type = CustomIndexArray<TimeSpan, AgeGroup>;
static auto get_default(AgeGroup size)
{
return CustomIndexArray<TimeSpan, AgeGroup>(size, hours(9));
}
static std::string name()
{
return "GotoSchoolTimeMaximum";
}
};
/**
* @brief The set of AgeGroups that can go to school.
*/
struct AgeGroupGotoSchool {
using Type = CustomIndexArray<bool, AgeGroup>;
static Type get_default(AgeGroup num_agegroups)
{
return Type(num_agegroups, false);
}
static std::string name()
{
return "AgeGroupGotoSchool";
}
};
/**
* @brief The set of AgeGroups that can go to work.
*/
struct AgeGroupGotoWork {
using Type = CustomIndexArray<bool, AgeGroup>;
static Type get_default(AgeGroup num_agegroups)
{
return Type(num_agegroups, false);
}
static std::string name()
{
return "AgeGroupGotoWork";
}
};
using ParametersBase =
ParameterSet<IncubationPeriod, InfectedNoSymptomsToSymptoms, InfectedNoSymptomsToRecovered,
InfectedSymptomsToRecovered, InfectedSymptomsToSevere, SevereToCritical, SevereToRecovered,
CriticalToDead, CriticalToRecovered, RecoveredToSusceptible, ViralLoadDistributions,
InfectivityDistributions, DetectInfection, MaskProtection, AerosolTransmissionRates, LockdownDate,
QuarantineDuration, SocialEventRate, BasicShoppingRate, WorkRatio, SchoolRatio, GotoWorkTimeMinimum,
GotoWorkTimeMaximum, GotoSchoolTimeMinimum, GotoSchoolTimeMaximum, AgeGroupGotoSchool,
AgeGroupGotoWork, InfectionProtectionFactor, SeverityProtectionFactor, HighViralLoadProtectionFactor>;
/**
* @brief Maximum number of Person%s an infectious Person can infect at the respective Location.
*/
struct MaximumContacts {
using Type = ScalarType;
static Type get_default(AgeGroup /*size*/)
{
return std::numeric_limits<ScalarType>::max();
}
static std::string name()
{
return "MaximumContacts";
}
};
/**
* contact rates
*/
struct ContactRates {
using Type = CustomIndexArray<ScalarType, AgeGroup, AgeGroup>;
static Type get_default(AgeGroup size)
{
return Type({size, size},
1.0); // amount of contacts from AgeGroup a to AgeGroup b per day
}
static std::string name()
{
return "ContactRates";
}
};
// If true, consider the capacity of the Cell%s of this Location for the computation of relative transmission risk.
struct UseLocationCapacityForTransmissions {
using Type = bool;
static Type get_default(AgeGroup)
{
return false;
}
static std::string name()
{
return "UseLocationCapacityForTransmissions";
}
};
/**
* @brief Parameters of the Infection that depend on the Location.
*/
using LocalInfectionParameters = ParameterSet<MaximumContacts, ContactRates, UseLocationCapacityForTransmissions>;
/**
* @brief Parameters of the simulation that are the same everywhere within the World.
*/
class Parameters : public ParametersBase
{
public:
Parameters(size_t num_agegroups)
: ParametersBase(AgeGroup(num_agegroups))
, m_num_groups(num_agegroups)
{
}
private:
Parameters(ParametersBase&& base)
: ParametersBase(std::move(base))
, m_num_groups(this->get<AgeGroupGotoWork>().size<AgeGroup>().get())
{
}
public:
/**
* @brief Get the number of the age groups.
*/
size_t get_num_groups() const
{
return m_num_groups;
}
/**
* @brief Checks whether all Parameters satisfy their corresponding constraints and logs an error
* if constraints are not satisfied.
* @return Returns true if one (or more) constraint(s) are not satisfied, otherwise false.
*/
bool check_constraints() const
{
for (auto i = AgeGroup(0); i < AgeGroup(m_num_groups); ++i) {
if (this->get<IncubationPeriod>()[{VirusVariant::Wildtype, i}] < 0) {
log_error("Constraint check: Parameter IncubationPeriod of age group {:.0f} smaller than {:.4f}",
(size_t)i, 0);
return true;
}
if (this->get<InfectedNoSymptomsToSymptoms>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter InfectedNoSymptomsToSymptoms of age group {:.0f} smaller "
"than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<InfectedNoSymptomsToRecovered>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter InfectedNoSymptomsToRecovered of age group {:.0f} smaller "
"than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<InfectedSymptomsToRecovered>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error(
"Constraint check: Parameter InfectedSymptomsToRecovered of age group {:.0f} smaller than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<InfectedSymptomsToSevere>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter InfectedSymptomsToSevere of age group {:.0f} smaller than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<SevereToCritical>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter SevereToCritical of age group {:.0f} smaller than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<SevereToRecovered>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter SevereToRecovered of age group {:.0f} smaller than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<CriticalToDead>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter CriticalToDead of age group {:.0f} smaller than {:d}", (size_t)i,
0);
return true;
}
if (this->get<CriticalToRecovered>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter CriticalToRecovered of age group {:.0f} smaller than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<RecoveredToSusceptible>()[{VirusVariant::Wildtype, i}] < 0.0) {
log_error("Constraint check: Parameter RecoveredToSusceptible of age group {:.0f} smaller than {:d}",
(size_t)i, 0);
return true;
}
if (this->get<DetectInfection>()[{VirusVariant::Wildtype, i}] < 0.0 ||
this->get<DetectInfection>()[{VirusVariant::Wildtype, i}] > 1.0) {
log_error("Constraint check: Parameter DetectInfection of age group {:.0f} smaller than {:d} or "
"larger than {:d}",
(size_t)i, 0, 1);
return true;
}
if (this->get<GotoWorkTimeMinimum>()[i].seconds() < 0.0 ||
this->get<GotoWorkTimeMinimum>()[i].seconds() > this->get<GotoWorkTimeMaximum>()[i].seconds()) {
log_error("Constraint check: Parameter GotoWorkTimeMinimum of age group {:.0f} smaller {:d} or "
"larger {:d}",
(size_t)i, 0, this->get<GotoWorkTimeMaximum>()[i].seconds());
return true;
}
if (this->get<GotoWorkTimeMaximum>()[i].seconds() < this->get<GotoWorkTimeMinimum>()[i].seconds() ||
this->get<GotoWorkTimeMaximum>()[i] > days(1)) {
log_error("Constraint check: Parameter GotoWorkTimeMaximum of age group {:.0f} smaller {:d} or larger "
"than one day time span",
(size_t)i, this->get<GotoWorkTimeMinimum>()[i].seconds());
return true;
}
if (this->get<GotoSchoolTimeMinimum>()[i].seconds() < 0.0 ||
this->get<GotoSchoolTimeMinimum>()[i].seconds() > this->get<GotoSchoolTimeMaximum>()[i].seconds()) {
log_error("Constraint check: Parameter GotoSchoolTimeMinimum of age group {:.0f} smaller {:d} or "
"larger {:d}",
(size_t)i, 0, this->get<GotoWorkTimeMaximum>()[i].seconds());
return true;
}
if (this->get<GotoSchoolTimeMaximum>()[i].seconds() < this->get<GotoSchoolTimeMinimum>()[i].seconds() ||
this->get<GotoSchoolTimeMaximum>()[i] > days(1)) {
log_error("Constraint check: Parameter GotoWorkTimeMaximum of age group {:.0f} smaller {:d} or larger "
"than one day time span",
(size_t)i, this->get<GotoSchoolTimeMinimum>()[i].seconds());
return true;
}
}
if (this->get<MaskProtection>()[MaskType::Community] < 0.0 ||
this->get<MaskProtection>()[MaskType::Community] > 1.0) {
log_error(
"Constraint check: Parameter MaskProtection for MaskType Community is smaller {:d} or larger {:d}", 0,
1);
return true;
}
if (this->get<MaskProtection>()[MaskType::FFP2] < 0.0 || this->get<MaskProtection>()[MaskType::FFP2] > 1.0) {
log_error("Constraint check: Parameter MaskProtection for MaskType FFP2 is smaller {:d} or larger {:d}", 0,
1);
return true;
}
if (this->get<MaskProtection>()[MaskType::Surgical] < 0.0 ||
this->get<MaskProtection>()[MaskType::Surgical] > 1.0) {
log_error("Constraint check: Parameter MaskProtection for MaskType Surgical smaller {:d} or larger {:d}", 0,
1);
return true;
}
if (this->get<LockdownDate>().seconds() < 0.0) {
log_error("Constraint check: Parameter LockdownDate smaller {:d}", 0);
return true;
}
return false;
}
/**
* deserialize an object of this class.
* @see epi::deserialize
*/
template <class IOContext>
static IOResult<Parameters> deserialize(IOContext& io)
{
BOOST_OUTCOME_TRY(auto&& base, ParametersBase::deserialize(io));
return success(Parameters(std::move(base)));
}
private:
size_t m_num_groups;
};
} // namespace abm
} // namespace mio
#endif