surgeryfred-paper.tex

% This is mymiccaipaper.tex the demonstration file of
% MICCAI 2006 for Latex2e
% adapted from LLNCS.DEM from
% the LaTeX macro package from Springer-Verlag
% for Lecture Notes in Computer Science,
% version 2.2 for LaTeX2e
%
%\documentclass[runningheads]{llncs}
\documentclass[a4paper, lmargin=1.925cm, rmargin=1.925cm,tmargin=2.54cm,bmargin=4.94cm]{spie}
%
\usepackage{makeidx}  % allows for indexgeneration
%st added this to help with anonymisation
%otherwise it took my name from one of the eps file
%This still got overwritten by the last eps file,
%had to manually pull the author out of that.
\pdfinfo{
%letterpaper,
%colorlinks,
%urlcolor=black,
pdfpagemode=none,
pdftitle={SciKit-SurgeryFRED},
pdfauthor={Stephen Thompson},
pdfcreator={},
pdfsubject={},
pdfkeywords={}
}
		  
%
\usepackage{multirow}
\usepackage{subcaption}
\usepackage{graphicx}
\usepackage{rotating}
\usepackage{array}
\usepackage{pifont}
\usepackage{url}
\usepackage{hyperref}

%this is trying to make a nice code listing box
\usepackage{listings}
\usepackage{xcolor}

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}

\lstset{style=mystyle}


\graphicspath{{pics/}{figs/}}
% list here all the paths to your figure folders
\usepackage{glossaries} %st - put this in to deal with acronyms tidily
%\usepackage[acronym=true,description]{glossaries} %st - put this in to deal with acronyms tidily
\include{acronyms} %removed relative path and replaced with symbolic link in this directory, see makefile.

\newcommand{\fred}{SciKit-SurgeryFRED }
\newcommand{\fredns}{SciKit-SurgeryFRED}
\newcommand{\sksurgery}{SciKit-Surgery }
\newcommand{\core}{SciKit-SurgeryCore }
\begin{document}
%
%\frontmatter          % for the preliminaries
%
%\authorrunning{S. Thompson et al.}   % abbreviated author list (for running head)
%\pagestyle{headings}  % switches on printing of running heads
%\pagestyle{empty}  % switches off printing of running heads
\pagestyle{plain}
%
%\mainmatter              % start of your contributions
%
\title{Are fiducial registration error and target registration error correlated? SciKit-SurgeryFRED for teaching and research.}
%\titlerunning{Laproscope Calibration}  % abbreviated title (for running head)
%
%\author{Stephen Thompson \and Matt Clarkson \and Johanned Totz \and Yi Song \and Danail Stoyanov \and David Hawkes }
%
\author{Stephen~Thompson\supit{1}, Tom~Dowrick\supit{1}, Mian~Ahmad\supit{1}, Jeremy~Opie\supit{1}, Matthew~J.~Clarkson\supit{1}
\skiplinehalf
\supit{1}Wellcome/EPSRC Centre for Interventional and Surgical Science, University College London, United Kingdom \\
}

%
%
%%%% modified list of authors for the TOC (add the affiliations)
%\tocauthor{Stephen Thompson (University College London),
%Matt Clarkson (University College London),
%Johannes Totz (University College London),
%Yi Song (University College London),
%David Hawkes (University College London)
%}
%
%\institute{Centre for Medical Image Computing, University College London.
%}

% The following lines are used to remove authors and affiliations from
% the front page and running titles
%\author{-, -, -}
%\authorrunning{-}
%\tocauthor{-}
%\institute{-}

\maketitle              % typeset the title of the contribution

\begin{center}
%\begin{small}
	© The Authors. Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.

	Cite as: Stephen Thompson, Tom Dowrick, Mian Ahmad, Jeremy Opie, Matthew J. Clarkson "Are fiducial registration error and target registration error correlated? SciKit-SurgeryFRED for teaching and research."
Proc. SPIE Medical Imaging 2021: 
Image-Guided Procedures, Robotic Interventions, and Modeling,
edited by Cristian A. Linte, Jeffrey H. Siewerdsen, 
Vol. 11598, 115980U. DOI: \href{https://doi.org/10.1117/12.2580159}{10.1117/12.2580159}
%\end{small}
\end{center}

\begin{abstract}
\input{abstract_250}
\end{abstract}

\input{introduction}
\input{methods}
\input{results}
\input{discussion}
\input{acknowledgements}
%\bibliographystyle{spie2008/myspiebib}
\bibliographystyle{spmpsci}

\bibliography{surgeryfred-paper.bib}

\end{document}