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NS137.scaffolded_NP_61.fasta.out
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NS137.scaffolded_NP_61.fasta.out
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SW perc perc perc query position in query matching repeat position in repeat
score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID
1972 7.1 9.9 7.1 NP_61 1120 1580 (275711) + DNAREP1_DM RC/Helitron 1 692 (0) 1
226 15.4 0.0 0.0 NP_61 1547 1585 (275706) + Hoyak2 DNA/hAT-Ac 1 39 (2522) 2 *
23105 17.6 8.4 1.6 NP_61 2646 9445 (267846) C Gypsy1-I_DM LTR/Gypsy (254) 7154 33 3
1752 15.7 5.8 3.3 NP_61 9522 9903 (267388) C Gypsy1-LTR_DM LTR/Gypsy (16) 392 2 3
2711 16.4 9.6 1.8 NP_61 10339 10945 (266346) + DNAREP1_DSim RC/Helitron 40 692 (0) 4
299 5.6 0.0 0.0 NP_61 10914 10949 (266342) + Hoyak2 DNA/hAT-Ac 1 36 (2525) 5 *
651 6.8 20.6 1.6 NP_61 12780 12934 (264357) + DNAREP1_DSim RC/Helitron 305 497 (97) 6 *
724 13.0 24.9 0.0 NP_61 12927 13123 (264168) + DNAREP1_DSim RC/Helitron 427 672 (20) 7
295 24.1 3.4 2.2 NP_61 13156 13244 (264047) C Gypsy5_I LTR/Gypsy (2435) 4074 3985 8
351 24.6 6.1 4.5 NP_61 13271 13402 (263889) + REP-1_DTa Other/Other 133 266 (2150) 9
3124 11.1 1.2 0.6 NP_61 13569 14047 (263244) C DM412_LTR LTR/Gypsy (89) 482 1 10
41332 3.0 3.5 0.8 NP_61 15358 20590 (256701) C Gypsy-8_DSim-I LTR/Gypsy (40) 5372 3 11
593 24.5 4.5 3.7 NP_61 20591 20840 (256451) C MDG1_I LTR/Gypsy (4600) 1514 1263 12
713 16.1 3.6 9.8 NP_61 22216 22548 (254743) C MDG1_I LTR/Gypsy (5731) 865 593 12
238 15.0 0.0 0.0 NP_61 22614 22653 (254638) C MDG1_I LTR/Gypsy (6051) 545 506 12
3048 14.3 0.8 0.8 NP_61 22655 23170 (254121) C MDG1_I LTR/Gypsy (6012) 584 69 12
225 24.1 5.2 0.0 NP_61 23175 23232 (254059) C Gypsy-57_DWil-I LTR/Gypsy (3332) 2389 2329 13
919 3.7 0.6 18.0 NP_61 23367 23529 (253762) C GTWIN_I LTR/Gypsy (100) 5312 5174 14 *
10560 12.2 2.4 0.1 NP_61 23523 25234 (252057) C GTWIN_I LTR/Gypsy (2962) 4560 2278 14
1253 5.4 0.4 19.6 NP_61 25370 25600 (251691) C Gypsy-8_DSim-I LTR/Gypsy (40) 5372 5179 15
14313 7.4 3.1 1.0 NP_61 25601 27665 (249626) C DM412_I LTR/Gypsy (4368) 2109 3 16
3336 8.2 1.0 1.9 NP_61 27668 28153 (249138) C DM412_LTR LTR/Gypsy (89) 482 1 17
2934 13.1 2.7 0.2 NP_61 28154 28673 (248618) C DM412_I LTR/Gypsy (5303) 1174 642 18
1169 18.1 1.1 7.7 NP_61 28674 28936 (248355) C Gypsy-3_DSe-I LTR/Gypsy (7126) 247 1 19
1342 8.2 0.0 6.8 NP_61 29070 29339 (247952) C Gypsy-3_DSe-LTR LTR/Gypsy (0) 379 1 19
21726 4.0 0.7 0.0 NP_61 29345 31915 (245376) + R1_DSi LINE/R1 2401 4989 (445) 20
1038 6.9 0.0 0.0 NP_61 31900 32029 (245262) + R1_DSi LINE/R1 481 610 (4746) 21 *
11019 5.0 3.0 0.0 NP_61 31998 33359 (243932) + R1_DSi LINE/R1 915 2272 (3162) 21
4219 8.9 6.9 0.3 NP_61 33392 33985 (243306) + R1_DM LINE/R1 4318 4950 (406) 22
11980 7.2 5.5 1.1 NP_61 33989 36003 (241288) + R1_DSi LINE/R1 27 2272 (3162) 23
4092 9.2 7.8 0.3 NP_61 36032 36620 (240671) + R1_DM LINE/R1 4318 4950 (406) 24
1066 13.2 11.2 4.6 NP_61 36624 36846 (240445) + R1_DSi LINE/R1 28 264 (5170) 25
936 14.9 3.5 0.0 NP_61 36836 37009 (240282) + R1_DM LINE/R1 309 488 (4868) 26 *
591 9.0 0.8 0.8 NP_61 37054 37144 (240147) + R1_DSi LINE/R1 1205 1334 (4110) 27
579 10.2 19.7 7.0 NP_61 37124 37250 (240041) + R1_DSi LINE/R1 123 264 (5170) 27 *
13336 6.8 2.8 0.9 NP_61 37240 39082 (238209) + R1_DSi LINE/R1 309 2272 (3162) 25
4205 9.1 6.9 0.3 NP_61 39116 39709 (237582) + R1_DSi LINE/R1 4318 4950 (406) 25
13391 7.5 3.5 1.1 NP_61 39713 41766 (235525) + R1_DSi LINE/R1 27 2272 (3162) 28
4205 9.1 6.9 0.3 NP_61 41801 42394 (234897) + R1_DSi LINE/R1 4318 4950 (406) 28
13349 7.6 3.6 1.1 NP_61 42398 44452 (232839) + R1_DSi LINE/R1 27 2272 (3162) 29
4235 9.6 6.8 0.0 NP_61 44485 45077 (232214) + R1_DSi LINE/R1 4391 5023 (411) 30 *
13409 7.7 3.5 1.0 NP_61 45061 47132 (230159) + R1_DSi LINE/R1 9 2272 (3162) 30
4179 9.1 7.1 0.3 NP_61 47164 47756 (229535) + R1_DM LINE/R1 4318 4950 (406) 31
1075 13.1 11.2 4.6 NP_61 47760 47983 (229308) + R1_DSi LINE/R1 27 264 (5170) 32 *
1100 15.1 0.6 0.0 NP_61 47973 48151 (229140) + R1_DM LINE/R1 309 488 (4868) 33
444 9.8 0.0 0.0 NP_61 48148 48208 (229083) + R1_DSi LINE/R1 585 645 (4789) 34 *
591 4.3 0.0 0.0 NP_61 48229 48297 (228994) + R1_DSi LINE/R1 1205 1273 (4161) 34
545 11.8 19.7 7.0 NP_61 48299 48425 (228866) + R1_DSi LINE/R1 123 264 (5170) 35 *
13360 6.7 2.5 1.2 NP_61 48415 50262 (227029) + R1_DSi LINE/R1 309 2272 (3162) 32
4205 9.1 6.9 0.3 NP_61 50293 50886 (226405) + R1_DSi LINE/R1 4318 4950 (406) 32
13404 7.5 3.5 1.2 NP_61 50890 52946 (224345) + R1_DSi LINE/R1 27 2272 (3162) 36
4219 8.9 6.9 0.3 NP_61 52981 53574 (223717) + R1_DSi LINE/R1 4318 4950 (406) 36
13441 7.4 3.5 1.1 NP_61 53578 55631 (221660) + R1_DSi LINE/R1 27 2272 (3162) 37
4219 8.9 6.9 0.3 NP_61 55664 56257 (221034) + R1_DSi LINE/R1 4318 4950 (406) 37
13349 7.6 3.5 1.1 NP_61 56261 58317 (218974) + R1_DSi LINE/R1 27 2272 (3162) 38
4413 9.2 3.9 0.3 NP_61 58351 58961 (218330) + R1_DM LINE/R1 4318 4950 (406) 39
13404 7.5 3.4 1.1 NP_61 58965 61025 (216266) + R1_DSi LINE/R1 27 2272 (3162) 40
4513 9.5 2.2 0.3 NP_61 61058 61678 (215613) + R1_DM LINE/R1 4318 4950 (406) 41
13241 7.4 3.5 1.6 NP_61 61682 63744 (213547) + R1_DSi LINE/R1 27 2272 (3162) 42
4394 9.1 4.6 0.3 NP_61 63778 64384 (212907) + R1_DM LINE/R1 4318 4950 (406) 43
14147 6.5 8.8 1.3 NP_61 64388 66479 (210812) + R1_DSi LINE/R1 27 2272 (3162) 44
4731 9.5 0.6 0.3 NP_61 66514 67144 (210147) + R1_DM LINE/R1 4318 4950 (406) 45
1094 12.6 11.2 4.6 NP_61 67148 67371 (209920) + R1_DSi LINE/R1 27 264 (5170) 46 *
1923 11.4 4.2 0.0 NP_61 67361 67649 (209642) + R1_DM LINE/R1 309 609 (4747) 47
4178 5.6 0.0 0.0 NP_61 67653 68150 (209141) + R1_DSi LINE/R1 1237 1734 (3700) 48
2357 3.0 0.0 0.0 NP_61 68161 68431 (208860) + R1_DSi LINE/R1 2002 2272 (3162) 48
1225 9.9 0.0 0.0 NP_61 68465 68626 (208665) + R1_DM LINE/R1 4318 4479 (877) 49
940 10.8 0.0 0.8 NP_61 68632 68761 (208530) + R1_DSi LINE/R1 4895 5023 (411) 50
5172 8.2 12.9 3.9 NP_61 68765 69736 (207555) + R1_DSi LINE/R1 27 1084 (4350) 51 *
7353 3.7 0.7 0.5 NP_61 69736 70606 (206685) + R1_DSi LINE/R1 1400 2272 (3162) 51
765 9.8 0.0 0.0 NP_61 70642 70743 (206548) + R1_DM LINE/R1 4318 4419 (937) 52 *
5075 13.6 4.8 3.4 NP_61 70739 71989 (205302) C Gypsy-13_DSim-LTR LTR/Gypsy (7068) 829 1 53
4460 16.6 2.0 8.3 NP_61 71990 73703 (203588) C Gypsy-13_DSim-I LTR/Gypsy (1219) 6678 4887 53
393 23.5 0.6 16.9 NP_61 73727 73905 (203386) C Gypsy-13_DSim-I LTR/Gypsy (1713) 2634 2481 53
29619 8.3 1.1 0.4 NP_61 73969 79857 (197434) C Gypsy-13_DSim-I LTR/Gypsy (656) 4788 1 54
4091 8.5 0.6 0.0 NP_61 79858 80389 (196902) + R1_DSi LINE/R1 4489 5023 (411) 55
1138 13.0 10.7 5.1 NP_61 80373 80615 (196676) + R1_DSi LINE/R1 9 264 (5170) 55 *
2017 10.8 4.0 0.0 NP_61 80605 80901 (196390) + R1_DM LINE/R1 309 617 (4739) 56
1530 9.6 0.0 1.8 NP_61 80881 81102 (196189) + R1_DSe LINE/R1 746 963 (4454) 57 *
5980 3.3 0.0 0.6 NP_61 81097 81797 (195494) + R1_DSi LINE/R1 1571 2267 (3167) 58
4774 9.9 0.5 0.0 NP_61 81842 82478 (194813) + R1_DSi LINE/R1 4391 5030 (404) 59
1091 14.2 10.3 4.7 NP_61 82455 82697 (194594) + R1_DSi LINE/R1 9 264 (5170) 59 *
1904 11.1 4.9 0.0 NP_61 82687 82974 (194317) + R1_DM LINE/R1 309 610 (4746) 60
11546 4.2 0.0 0.3 NP_61 82984 84343 (192948) + R1_DSi LINE/R1 917 2272 (3162) 61
4783 8.7 0.6 0.2 NP_61 84379 85008 (192283) + R1_DM LINE/R1 4318 4950 (406) 62
1084 13.4 10.7 5.5 NP_61 84992 85235 (192056) + R1_DSi LINE/R1 9 264 (5170) 63 *
5936 8.8 1.6 3.0 NP_61 85234 86333 (190958) + R1_DSi LINE/R1 387 1491 (4022) 59
5766 3.4 0.0 0.6 NP_61 86334 87012 (190279) + R1_DSi LINE/R1 1598 2272 (3162) 59
4448 9.2 0.7 0.0 NP_61 87047 87635 (189656) + R1_DM LINE/R1 4318 4910 (446) 64
43387 2.6 2.8 0.5 NP_61 87761 93327 (183964) C BLOOD_I LTR/Gypsy (0) 6613 1 65
5444 1.8 6.7 1.4 NP_61 93328 94500 (182791) C BLOOD_I LTR/Gypsy (5376) 1237 1 65
1986 4.0 2.3 4.7 NP_61 94631 94894 (182397) C BLOOD_LTR LTR/Gypsy (141) 258 1 66
382 13.8 0.0 1.7 NP_61 94895 94944 (182347) + R1_DSe LINE/R1 4960 5008 (409) 67 *
2026 12.9 6.7 2.5 NP_61 94928 95454 (181837) + R1_DSi LINE/R1 9 614 (4742) 68
6545 3.3 0.0 0.5 NP_61 95455 96215 (181076) + R1_DSi LINE/R1 1516 2272 (3162) 68
4822 9.1 0.5 0.0 NP_61 96249 96878 (180413) + R1_DSi LINE/R1 4391 5023 (411) 69
1056 13.9 10.7 5.5 NP_61 96862 97105 (180186) + R1_DSi LINE/R1 9 264 (5170) 69 *
3224 11.8 1.6 5.6 NP_61 97104 97931 (179360) + R1_DSe LINE/R1 387 1184 (4329) 70 *
5158 4.7 0.0 0.7 NP_61 97931 98552 (178739) + R1_DSi LINE/R1 1400 2017 (3417) 71
8207 4.2 0.9 0.0 NP_61 98562 99525 (177766) + R1_DSi LINE/R1 4457 5429 (5) 71
1686 4.1 0.2 0.6 NP_61 99511 99759 (177532) C Gypsy-13_DSim-LTR LTR/Gypsy (457) 314 1 72 *
1288 8.8 0.5 2.1 NP_61 99730 99925 (177366) C Gypsy-13_DSim-I LTR/Gypsy (1) 5443 5251 72 *
2575 3.8 0.0 2.2 NP_61 99941 100263 (177028) C NINJA_LTR LTR/Pao (1) 316 1 73
9910 1.9 0.1 0.2 NP_61 100264 101390 (175901) C NINJA_I LTR/Pao (0) 6011 4886 73 *
24711 2.2 0.2 0.9 NP_61 101381 104304 (172987) C NINJA_I LTR/Pao (3064) 2947 1 73
290 2.9 0.0 0.0 NP_61 104305 104338 (172953) C NINJA_LTR LTR/Pao (0) 317 284 73 *
1952 1.8 0.5 0.0 NP_61 104338 104560 (172731) C NINJA_I LTR/Pao (902) 5109 4886 74 *
7460 5.9 1.4 1.2 NP_61 104545 105717 (171574) C NINJA_I LTR/Pao (3064) 2947 1690 74
2603 3.2 0.3 2.2 NP_61 105719 106041 (171250) C NINJA_LTR LTR/Pao (0) 317 1 75
5687 16.0 6.9 5.6 NP_61 106042 108434 (168857) C Gypsy8_I LTR/Gypsy (212) 5232 2451 76
317 22.0 7.9 0.9 NP_61 108436 108507 (168784) C ZAM_LTR LTR/Gypsy (0) 472 394 77
45682 6.4 1.4 0.5 NP_61 108508 108916 (168375) C ZAM_I LTR/Gypsy (0) 7490 6998 77
295 29.5 0.9 0.9 NP_61 108917 109029 (168262) + noCat_dsim_final-B-P113.23-Map3_novel_repeat DNA/RC 708 820 (43) 78
45682 6.4 1.4 0.5 NP_61 109030 114825 (162466) C ZAM_I LTR/Gypsy (0) 6997 1 77
2255 11.5 9.7 1.1 NP_61 114826 115250 (162041) C ZAM_I LTR/Gypsy (6080) 1410 949 77
698 21.8 4.7 5.8 NP_61 115251 115440 (161851) C NOMAD_LTR LTR/Gypsy (0) 518 331 79
461 23.4 16.8 0.8 NP_61 115615 115853 (161438) C Gypsy-3_DSe-LTR LTR/Gypsy (2) 377 96 80
239 6.2 0.0 0.0 NP_61 115888 115919 (161372) C NOMAD_LTR LTR/Gypsy (486) 32 1 81
10449 13.5 1.8 2.3 NP_61 115920 118701 (158590) C NOMAD_I LTR/Gypsy (11) 7528 4567 81 *
18012 4.0 0.1 0.0 NP_61 118700 120763 (156528) C NOMAD_I LTR/Gypsy (2250) 4322 2258 81
17842 5.9 0.3 3.3 NP_61 121818 124155 (153136) C NOMAD_I LTR/Gypsy (4313) 2259 1 81
783 16.7 6.5 7.2 NP_61 124129 124331 (152960) C NOMAD_LTR LTR/Gypsy (0) 518 188 81 *
227 25.6 5.3 4.2 NP_61 124506 124599 (152692) C Gypsy-3_DSe-LTR LTR/Gypsy (2) 377 283 82 *
349 19.6 17.4 0.0 NP_61 124572 124663 (152628) C Gypsy-3_DSe-LTR LTR/Gypsy (17) 362 255 82
2223 10.8 6.6 0.8 NP_61 124667 125030 (152261) + DIVER2_LTR LTR/Pao 1 385 (0) 83 *
18551 2.9 0.7 0.5 NP_61 125007 127184 (150107) + BEL-6_DYa-I LTR/Pao 1 2157 (3318) 83
1734 5.0 0.7 3.6 NP_61 127167 127397 (149894) + BEL-6_DYa-I LTR/Pao 3711 4021 (1699) 83 *
969 7.1 0.8 0.8 NP_61 127399 127526 (149765) + BEL-6_DYa-I LTR/Pao 4321 4448 (1027) 83
618 2.8 0.0 0.0 NP_61 127507 127577 (149714) + BEL-6_DYa-I LTR/Pao 5405 5475 (0) 83 *
2036 10.7 8.4 0.8 NP_61 127578 127935 (149356) + DIVER2_LTR LTR/Pao 1 385 (0) 83
274 11.6 4.7 0.0 NP_61 128048 128090 (149201) C NOMAD_LTR LTR/Gypsy (373) 145 101 84 *
1708 7.7 0.0 0.0 NP_61 128080 128301 (148990) C ZAM_I LTR/Gypsy (6845) 645 424 85
3153 4.0 0.5 0.0 NP_61 128349 128725 (148566) C STALKER4_LTR LTR/Gypsy (23) 379 1 86
28797 1.4 0.5 0.1 NP_61 128726 132063 (145228) C STALKER4_I LTR/Gypsy (0) 6530 3179 86
2323 13.8 2.5 2.5 NP_61 132221 132622 (144669) C GTWIN_LTR LTR/Gypsy (93) 402 1 87
12104 7.1 0.1 0.0 NP_61 132632 134129 (143162) C GTWIN_I LTR/Gypsy (1) 6420 4921 87
16309 15.1 0.9 0.4 NP_61 134191 138618 (138673) C GTWIN_I LTR/Gypsy (1486) 5021 466 87
36057 1.1 0.1 0.2 NP_61 138747 142685 (134606) C LINEJ1_DM LINE/Jockey (0) 5020 1087 88
380 0.0 0.0 14.3 NP_61 142686 142749 (134542) + LINEJ1_DM LINE/Jockey 4965 5020 (0) 89
799 15.3 24.0 1.0 NP_61 142775 143024 (134267) C GTWIN_I LTR/Gypsy (6200) 307 1 87
1536 18.8 8.2 2.1 NP_61 143115 143479 (133812) C Gypsy_LTR LTR/Gypsy (95) 387 1 90
2918 7.2 0.0 1.5 NP_61 143480 143876 (133415) C DM412_I LTR/Gypsy (3802) 2675 2285 91
2450 13.6 1.0 2.5 NP_61 144034 144441 (132850) C GTWIN_LTR LTR/Gypsy (93) 402 1 92
18010 3.2 2.2 0.7 NP_61 144442 146703 (130588) C STALKER4_I LTR/Gypsy (3348) 3182 888 93
35029 3.4 0.6 0.4 NP_61 147114 151405 (125886) C Gypsy-12_DSim-I LTR/Gypsy (483) 4300 2 94
2088 7.6 5.7 1.4 NP_61 151383 151749 (125542) C Gypsy-12_DSim-LTR LTR/Gypsy (0) 594 1 95 *
300 18.1 3.6 10.6 NP_61 151750 151838 (125453) C IDEFIX_LTR LTR/Gypsy (402) 192 111 96 *
702 12.7 10.6 6.4 NP_61 151832 151982 (125309) C IDEFIX_LTR LTR/Gypsy (429) 165 9 97 *
2251 16.5 5.3 5.9 NP_61 151979 152740 (124551) C Gypsy-31_DYa-I LTR/Gypsy (6684) 884 422 98
2224 10.2 2.8 4.1 NP_61 152803 153200 (124091) C Gypsy-31_DYa-I LTR/Gypsy (7175) 393 1 98
2666 11.0 2.7 1.0 NP_61 153326 153730 (123561) C Gypsy-31_DYa-I LTR/Gypsy (2) 7566 7155 99
1965 9.0 0.6 0.5 NP_61 153730 154044 (123247) C Gypsy-13_DSim-LTR LTR/Gypsy (395) 376 1 100 *
1195 14.5 2.0 8.5 NP_61 154015 154312 (122979) C Gypsy8_I LTR/Gypsy (1) 5443 5238 100 *
292 28.4 4.9 1.0 NP_61 154476 154660 (122631) C Gypsy-15_DRh-I LTR/Gypsy (723) 5325 5134 101
5882 9.2 1.3 4.0 NP_61 154679 155595 (121696) C Gypsy8_I LTR/Gypsy (1004) 3343 2451 100
347 17.5 0.0 0.0 NP_61 155961 156017 (121274) + noCat_dsim_final-B-P113.23-Map3_novel_repeat DNA/RC 753 809 (54) 102
334 28.4 2.7 2.7 NP_61 156018 156065 (121226) C Gypsy8_I LTR/Gypsy (387) 2407 2309 100
294 28.7 6.8 4.7 NP_61 156834 157275 (120016) C TIRANT_I LTR/Gypsy (873) 6819 6369 103
1287 31.8 3.6 1.9 NP_61 157438 158316 (118975) C Gypsy-5_DSim-I LTR/Gypsy (1486) 5023 4130 104
1469 25.6 1.8 4.0 NP_61 158331 158843 (118448) C Gypsy-5_DSim-I LTR/Gypsy (3405) 3757 3256 104
252 28.5 11.9 4.6 NP_61 159067 159622 (117669) C Gypsy-5_DSim-I LTR/Gypsy (4127) 2161 1371 105
369 34.0 3.1 2.8 NP_61 159913 160269 (117022) C Gypsy-5_DSim-I LTR/Gypsy (5455) 1054 697 105
297 30.1 0.0 0.0 NP_61 160283 160385 (116906) C Gypsy-5_DSim-I LTR/Gypsy (5913) 596 494 105
2700 2.2 0.6 0.9 NP_61 161700 162017 (115274) + NINJA_LTR LTR/Pao 1 317 (0) 106
4331 6.0 3.1 7.6 NP_61 162018 162715 (114576) + NINJA_I LTR/Pao 1 669 (5342) 106
264 8.6 0.0 0.0 NP_61 162705 162739 (114552) C Gypsy-5_DSim-I LTR/Gypsy (7127) 35 1 105 *
3274 1.4 0.3 1.1 NP_61 162740 163111 (114180) C TABOR_LTR LTR/Gypsy (0) 369 1 105
352 24.6 1.8 4.6 NP_61 163055 163114 (114177) + noCat_dsim_final-B-P113.23-Map3_novel_repeat DNA/RC 702 758 (105) 107 *
43378 6.6 1.5 0.6 NP_61 163115 169808 (107483) C Gypsy-5_DSim-I LTR/Gypsy (0) 6509 245 105
33996 2.4 10.6 0.8 NP_61 169809 176027 (101264) C Gypsy-5_DSim-I LTR/Gypsy (0) 6336 1 105
366 3.2 14.3 0.0 NP_61 176072 176134 (101157) C TABOR_LTR LTR/Gypsy (77) 429 358 108
7882 1.6 0.1 0.1 NP_61 176266 177144 (100147) C Gypsy-5_DSim-I LTR/Gypsy (6283) 879 1 109
3231 1.4 0.5 1.4 NP_61 177145 177516 (99775) C Gypsy-5_DSim-LTR LTR/Gypsy (0) 369 1 109
39731 5.3 0.4 0.1 NP_61 177520 182824 (94467) + NINJA_I LTR/Pao 666 5547 (0) 110
2705 2.2 0.6 0.9 NP_61 182825 183142 (94149) + NINJA_LTR LTR/Pao 1 317 (0) 110
618 10.3 0.0 1.1 NP_61 183277 183364 (93927) + R1_DSi LINE/R1 2192 2278 (3156) 111
3532 9.7 0.0 0.4 NP_61 183373 183849 (93442) + R1_DSi LINE/R1 4549 5023 (411) 111 *
17484 7.1 4.0 1.9 NP_61 183833 186232 (91059) + R1_DSi LINE/R1 9 2457 (2977) 111
1110 18.9 9.2 2.9 NP_61 186368 186662 (90629) C TIRANT_LTR LTR/Gypsy (104) 313 1 112 *
37027 18.2 0.5 0.1 NP_61 186654 192959 (84332) C TIRANT_I LTR/Gypsy (0) 7692 1369 113
2552 26.4 2.7 11.4 NP_61 193191 194259 (83032) C TIRANT_I LTR/Gypsy (6356) 1336 351 113
620 18.8 3.9 0.6 NP_61 194283 194437 (82854) C TIRANT_I LTR/Gypsy (7532) 160 1 113
1110 18.9 9.2 2.9 NP_61 194564 194858 (82433) C TIRANT_LTR LTR/Gypsy (104) 313 1 114
20070 3.6 0.7 0.2 NP_61 194859 197228 (80063) + R1_DSi LINE/R1 2489 4869 (565) 115
2029 9.7 0.0 0.0 NP_61 197251 197529 (79762) + R1_DM LINE/R1 335 613 (4743) 116 *
32420 3.4 0.8 0.1 NP_61 197529 201293 (75998) + R1_DSi LINE/R1 1076 4869 (565) 117
2046 9.3 0.0 0.0 NP_61 201316 201594 (75697) + R1_DM LINE/R1 335 613 (4743) 118 *
32797 3.2 0.3 0.1 NP_61 201594 205377 (71914) + R1_DSi LINE/R1 1076 4869 (565) 119
2024 9.7 0.0 0.0 NP_61 205400 205678 (71613) + R1_DM LINE/R1 335 613 (4743) 120 *
32478 3.2 1.1 0.0 NP_61 205678 209432 (67859) + R1_DSi LINE/R1 1076 4869 (565) 121
37118 4.1 1.4 0.4 NP_61 209455 213915 (63376) + R1_DSi LINE/R1 366 4869 (565) 122
37223 3.9 1.4 0.6 NP_61 213938 218403 (58888) + R1_DSi LINE/R1 366 4869 (565) 122
32465 4.8 1.1 0.6 NP_61 218426 222558 (54733) + R1_DSi LINE/R1 364 4869 (565) 122
39716 3.7 1.1 0.4 NP_61 222581 227284 (50007) + R1_DSi LINE/R1 366 5103 (331) 123
1662 4.2 0.0 0.0 NP_61 227283 227475 (49816) + R1_DSi LINE/R1 5157 5349 (7) 122 *
870 13.2 0.0 0.7 NP_61 227479 227615 (49676) C Gypsy8_LTR LTR/Gypsy (168) 136 1 124
2841 18.5 3.2 7.1 NP_61 227616 229080 (48211) C Gypsy8_I LTR/Gypsy (242) 5202 3407 124
3646 2.6 0.0 0.0 NP_61 229089 229505 (47786) C TIRANT_LTR LTR/Gypsy (0) 417 1 125 *
64616 1.3 1.2 0.3 NP_61 229497 237022 (40269) C TIRANT_I LTR/Gypsy (0) 7692 1 126
3324 2.8 4.8 0.0 NP_61 237023 237420 (39871) C TIRANT_LTR LTR/Gypsy (0) 417 1 126
1020 13.1 0.0 4.0 NP_61 237614 237796 (39495) C Gypsy8_I LTR/Gypsy (1004) 3343 3168 124 *
3727 9.7 2.4 2.4 NP_61 237794 238376 (38915) C Gypsy8_I LTR/Gypsy (1314) 3033 2451 124
272 25.0 7.9 0.9 NP_61 238378 238449 (38842) C ZAM_LTR LTR/Gypsy (0) 472 394 127
2196 14.9 9.6 1.3 NP_61 238450 238885 (38406) C ZAM_LTR LTR/Gypsy (0) 472 1 127
37468 5.0 0.7 0.5 NP_61 238887 244419 (32872) C Gypsy-13_DSim-I LTR/Gypsy (1051) 4393 1 128
2180 10.1 6.1 1.5 NP_61 244431 244824 (32467) C Gypsy-10_DSim-I LTR/Gypsy (128) 5500 5089 129
5573 0.2 0.0 0.0 NP_61 244826 245422 (31869) C Gypsy-10_DSim-I LTR/Gypsy (855) 4333 3737 129
373 11.1 0.0 1.6 NP_61 245424 245481 (31810) C IDEFIX_I LTR/Gypsy (538) 5090 5034 130
2352 10.6 4.8 2.1 NP_61 245482 245856 (31435) C DIVER2_LTR LTR/Pao (0) 385 1 131
4064 14.1 0.8 0.6 NP_61 245857 246517 (30774) C IDEFIX_I LTR/Gypsy (591) 5037 4376 130
1845 1.9 0.0 0.5 NP_61 246518 246727 (30564) C Gypsy-7_DSe-LTR LTR/Gypsy (0) 258 50 132
1713 4.8 0.5 0.0 NP_61 246728 246933 (30358) C Chimpo_LTR LTR/Gypsy (0) 207 1 133
36793 1.0 0.7 0.0 NP_61 246934 250963 (26328) C Chimpo_I LTR/Gypsy (0) 4059 1 133
1713 4.8 0.5 0.0 NP_61 250964 251169 (26122) C Chimpo_LTR LTR/Gypsy (0) 207 1 133
481 1.9 0.0 0.0 NP_61 251170 251222 (26069) C Gypsy-7_DSe-LTR LTR/Gypsy (205) 53 1 132
2023 14.8 0.0 0.3 NP_61 251223 251558 (25733) C IDEFIX_I LTR/Gypsy (1249) 4379 4045 130 *
2061 13.3 6.4 2.6 NP_61 251532 251939 (25352) C MDG1_LTR LTR/Gypsy (19) 423 1 134
513 9.1 4.5 3.4 NP_61 251922 252117 (25174) C MDG1_I LTR/Gypsy (0) 6596 6213 135 *
6882 5.9 4.9 0.6 NP_61 252095 253031 (24260) + MDG1_I LTR/Gypsy 1164 2140 (4456) 136
2436 9.1 6.0 0.3 NP_61 253032 253395 (23896) C DIVER2_LTR LTR/Pao (0) 385 1 137
26128 4.2 3.7 1.1 NP_61 253396 256771 (20520) + MDG1_I LTR/Gypsy 2136 5598 (998) 136
1105 8.3 0.1 0.0 NP_61 256754 256916 (20375) C MDG1_I LTR/Gypsy (859) 5737 5593 135 *
22238 4.2 1.5 1.0 NP_61 256916 259713 (17578) C MDG1_I LTR/Gypsy (1651) 4945 2136 135
2436 9.1 6.0 0.3 NP_61 259714 260077 (17214) + DIVER2_LTR LTR/Pao 1 385 (0) 138
6397 6.1 4.4 1.0 NP_61 260078 260961 (16330) C MDG1_I LTR/Gypsy (4456) 2140 1227 135
453 13.3 7.8 0.0 NP_61 261149 261276 (16015) C MDG1_I LTR/Gypsy (5354) 1242 1105 135
2930 10.7 7.5 3.2 NP_61 261391 261922 (15369) C MDG1_I LTR/Gypsy (5669) 927 374 135
360 9.6 1.9 0.0 NP_61 261923 261974 (15317) C MDG1_I LTR/Gypsy (6471) 125 73 135
10086 4.5 2.6 1.6 NP_61 262034 263300 (13991) C Helena_Ds LINE/Jockey (14) 4898 3619 139
1620 3.2 0.0 0.0 NP_61 263300 263488 (13803) + ROOA_LTR LTR/Pao 198 386 (0) 140 *
2233 7.3 1.0 0.0 NP_61 263515 263828 (13463) C Gypsy-2_DSim-LTR LTR/Gypsy (771) 392 1 141
307 2.8 0.0 0.0 NP_61 263833 263868 (13423) C MDG1_I LTR/Gypsy (6790) 36 1 135
11495 6.2 0.2 0.2 NP_61 263869 265518 (11773) C MDG1_I LTR/Gypsy (254) 7154 5576 135
10426 3.7 1.3 0.6 NP_61 265534 266769 (10522) + DIVER_I LTR/Pao 1 1245 (4398) 142
2650 5.2 0.7 10.3 NP_61 266802 267205 (10086) C Gypsy-5_DSim-LTR LTR/Gypsy (0) 369 1 143
304 24.7 1.7 8.3 NP_61 267149 267212 (10079) + noCat_dsim_final-B-P113.23-Map3_novel_repeat DNA/RC 702 758 (105) 144 *
5375 1.4 0.0 0.0 NP_61 267213 267803 (9488) C Gypsy-5_DSim-I LTR/Gypsy (3) 7159 6569 143
2331 0.4 0.4 0.0 NP_61 267807 268058 (9233) C Gypsy-2_DSe-LTR LTR/Gypsy (0) 253 1 145
59363 0.2 0.0 0.1 NP_61 268059 274471 (2820) C Gypsy-2_DSe-I LTR/Gypsy (0) 6411 1 145
1742 0.5 0.5 0.0 NP_61 274472 274660 (2631) C Gypsy-2_DSe-LTR LTR/Gypsy (0) 253 64 145
3860 0.9 0.0 0.2 NP_61 274661 275091 (2200) C Gypsy5_LTR LTR/Gypsy (0) 430 1 146
597 0.0 0.0 0.0 NP_61 275092 275158 (2133) C Gypsy-2_DSe-LTR LTR/Gypsy (186) 67 1 145
225 0.0 0.0 0.0 NP_61 275159 275182 (2109) C Gypsy-2_DSe-I LTR/Gypsy (0) 6411 6388 145
9939 21.5 0.2 0.3 NP_61 275183 277291 (0) C Gypsy-2_DSe-I LTR/Gypsy (591) 5918 3813 145