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SZ_232_3_pilon_2_NP_60.fasta.out
275 lines (275 loc) · 24.1 KB
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SZ_232_3_pilon_2_NP_60.fasta.out
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409 23.6 15 0.7 NP_60 161 386 -428593 C Gypsy-3_DSe-LTR LTR/Gypsy -2 377 114 1 225
1638 3.5 0 0 NP_60 155139 155341 -273638 + Copia1-LTR_DM LTR/Copia 1 203 0 87 202
1638 3.5 0 0 NP_60 159461 159663 -269316 + Copia1-LTR_DM LTR/Copia 1 203 0 87 202
743 28.2 0.1 0.5 NP_60 85987 86190 -342789 C Gypsy2_I LTR/Gypsy -1124 5011 4835 42 203
743 28.2 0.1 0.5 NP_60 122467 122670 -306309 C Gypsy2_I LTR/Gypsy -1124 5011 4835 66 203
594 26.2 1.9 4.4 NP_60 267604 267811 -161168 + NOMAD_LTR LTR/Gypsy 316 518 0 134 207
1574 3.4 0 0 NP_60 284423 284631 -144348 C MDG1_I LTR/Gypsy -3125 3471 3263 147 208
1746 0.9 0.9 1.4 NP_60 315693 315908 -113071 + ACCORD2_LTR LTR/Gypsy 1 215 0 158 215
594 24 2.2 3.9 NP_60 259609 259829 -169150 + NOMAD_LTR LTR/Gypsy 188 518 0 134 220
955 11.8 12.2 4.6 NP_60 349210 349431 -79548 C R1_DSi Non-LTR_retrotransposon/R1 -5170 264 27 174 221
398 32 1.8 0.4 NP_60 25357 25582 -403397 + Gypsy-10_DMoj-LTR LTR/Gypsy 2246 2474 -552 15 225
410 31.6 1.8 0.4 NP_60 149076 149301 -279678 + Gypsy-10_DMoj-LTR LTR/Gypsy 2246 2474 -552 84 225
1644 2.6 11.4 0 NP_60 153413 153639 -275340 + Gypsy-1_DSe-I LTR/Gypsy 3816 4068 -2360 86 226
1404 9.7 2.2 0 NP_60 162472 162699 -266280 C MDG1_I LTR/Gypsy -5544 1052 820 90 227
312 26.2 5.7 7 NP_60 122953 123182 -305797 + ACCORD_I LTR/Gypsy 1986 2163 -4125 67 229
1424 2.5 0 16.6 NP_60 336938 337171 -91808 C DM412B_LTR LTR/Gypsy -371 200 1 166 233
355 24.1 8.9 6.6 NP_60 86473 86708 -342271 + ACCORD_I LTR/Gypsy 1986 2163 -4125 43 235
1005 11.5 23 1.2 NP_60 380734 380981 -47998 + Gypsy8_I LTR/Gypsy 3027 3328 -1019 189 247
925 19.2 2.6 2.4 NP_60 325408 325656 -103323 + Gypsy-31_DEl-I LTR/Gypsy 397 639 -6187 163 248
1204 9.6 0.4 12.9 NP_60 258518 258769 -170210 C DIVER_LTR LTR/Pao 0 224 1 132 251
1901 4.8 0.4 0 NP_60 312665 312916 -116063 + Gypsy-13_DSim-I LTR/Gypsy 4141 4393 -1051 153 251
988 19.6 2.8 5.3 NP_60 255791 256043 -172936 + Gypsy-3_DSe-I LTR/Gypsy 1 247 -7126 127 252
2110 1.6 0.4 0 NP_60 160346 160600 -268379 C STALKER4_LTR LTR/Gypsy -146 256 1 88 254
1018 7.8 2.5 2.2 NP_60 293960 294221 -134758 + MDG1_I LTR/Gypsy 6213 6594 -2 152 261
715 27.9 0.8 0.4 NP_60 91442 91704 -337275 C Gypsy5_I LTR/Gypsy -4093 2416 2153 48 262
664 16.8 3.7 4.6 NP_60 424029 424291 -4688 + Gypsy-8_DSim-I LTR/Gypsy 593 866 -5603 213 262
730 28.1 0.4 0.4 NP_60 127935 128198 -300781 C Gypsy5_I LTR/Gypsy -4093 2416 2153 72 263
1252 16 4.2 0.7 NP_60 267999 268263 -160716 + DM412B_LTR LTR/Gypsy 161 434 -137 139 264
1233 8.1 0.4 7.3 NP_60 234875 235144 -193835 + Gypsy-3_DSe-LTR LTR/Gypsy 1 379 0 120 269
1070 9.4 4.9 0 NP_60 294222 294496 -134483 + MDG1_LTR LTR/Gypsy 36 241 -201 153 274
2146 2.9 0 0.4 NP_60 232057 232333 -196646 + Copia_LTR LTR/Copia 1 276 0 121 276
2116 2.9 0 0.7 NP_60 227186 227463 -201516 + Copia_LTR LTR/Copia 1 276 0 121 277
2029 5 1.1 0.7 NP_60 328522 328801 -100178 C DM412B_LTR LTR/Gypsy -89 482 202 165 279
1538 8.4 1.7 5.4 NP_60 185760 186047 -242932 C BATUMI_I LTR/Pao -679 7284 7007 96 287
1746 11.8 4.2 0 NP_60 348932 349220 -79759 C R1_DM Non-LTR_retrotransposon/R1 -4747 609 309 175 288
943 11.3 8.3 1.6 NP_60 128703 128994 -299985 C Gypsy-1_DSim-I LTR/Gypsy -20 7002 6841 73 291
1078 12.9 4.1 5 NP_60 66977 67269 -361710 + Gypsy-6_DSim-LTR LTR/Gypsy 16 367 0 28 292
943 12.6 5.7 1.7 NP_60 70721 71013 -357966 + Gypsy-1_DSim-I LTR/Gypsy 6841 7002 -20 29 292
943 12.2 5.7 1.7 NP_60 102844 103136 -325843 + Gypsy-1_DSim-I LTR/Gypsy 6841 7002 -20 52 292
943 11.9 5.7 1.7 NP_60 134833 135125 -293854 + Gypsy-1_DSim-I LTR/Gypsy 6841 7002 -20 74 292
887 11.5 10.1 1.9 NP_60 92206 92501 -336478 C Gypsy-1_DSim-I LTR/Gypsy -20 7002 6841 49 295
913 12.3 7.5 1.9 NP_60 107278 107574 -321405 + Gypsy-1_DSim-I LTR/Gypsy 6618 7002 -20 53 296
1386 8.4 11.7 6.3 NP_60 186068 186384 -242595 C MDG1_I LTR/Gypsy -5718 878 546 97 316
1052 9.7 18.2 6.2 NP_60 26581 26898 -402081 + Gypsy-1_DSe-LTR LTR/Gypsy 5 358 0 17 317
1095 9.6 17.8 6.2 NP_60 150295 150615 -278364 + Gypsy-1_DSe-LTR LTR/Gypsy 3 358 0 86 320
2439 4.6 0 0 NP_60 95396 95718 -333261 + Gypsy-1_DSim-I LTR/Gypsy 3760 4082 -2940 50 322
2236 6.5 1 0 NP_60 268967 269293 -159686 + Gypsy-2_DSim-LTR LTR/Gypsy 1 405 -758 141 326
701 27.3 2.7 1.8 NP_60 110004 110331 -318648 + Gypsy-31_DYa-I LTR/Gypsy 5327 5657 -1833 54 327
792 22.2 4.7 3.2 NP_60 10344 10672 -418307 + Gypsy5_I LTR/Gypsy 245 450 -6059 4 328
721 27.6 2.4 1.8 NP_60 73470 73798 -355181 + ZAM_I LTR/Gypsy 5327 5657 -1833 31 328
700 28.5 2.1 1.8 NP_60 137556 137887 -291092 + ZAM_I LTR/Gypsy 5327 5659 -1831 76 331
1870 12 0.5 0.7 NP_60 75731 76072 -352907 C Gypsy-13_DSim-LTR LTR/Gypsy -112 659 388 32 341
1910 11.4 0.5 0.7 NP_60 112248 112589 -316390 C Gypsy-13_DSim-LTR LTR/Gypsy -112 659 388 56 341
350 31.6 1.7 6 NP_60 137185 137531 -291448 + Gypsy-31_DYa-I LTR/Gypsy 5600 5932 -1280 75 346
364 31.8 1.4 6 NP_60 109632 109979 -319000 + ACCORD2_I LTR/Gypsy 5600 5932 -1280 55 347
1340 17.9 7.7 1.9 NP_60 324873 325224 -103755 + Gypsy-1_DSim-I LTR/Gypsy 5997 6368 -60 162 351
2837 0.9 0 2 NP_60 209031 209389 -219590 C LINEJ1_DM Non-LTR_retrotransposon/Jockey 0 5020 4669 109 358
3016 2.2 0 0 NP_60 32663 33023 -395956 + Gypsy-1_DSe-I LTR/Gypsy 5997 6357 -71 17 360
3076 1.4 0 0 NP_60 178436 178796 -250183 + BEL_LTR LTR/Pao 1 361 0 95 360
3037 1.9 0 0 NP_60 184188 184548 -244431 + BEL_LTR LTR/Pao 1 361 0 95 360
2686 6.1 0.8 0 NP_60 284632 284992 -143987 + Gypsy10_LTR LTR/Gypsy 1 364 0 149 360
2618 6.1 1.1 0.3 NP_60 291603 291963 -137016 + Gypsy10_LTR LTR/Gypsy 1 364 0 150 360
439 29.3 0.6 1.2 NP_60 82144 82505 -346474 + Gypsy-26_DBp-I LTR/Gypsy 2219 2361 -1801 35 361
439 29.3 0.6 1.2 NP_60 118612 118973 -310006 + Gypsy-26_DBp-I LTR/Gypsy 2219 2361 -1801 59 361
2777 3 5.5 0 NP_60 232334 232695 -196284 + Gypsy-3_DSe-I LTR/Gypsy 1783 2164 -4366 120 361
3031 2.5 0 0 NP_60 258779 259140 -169839 + Gypsy-9_DSim-LTR LTR/Gypsy 1 362 0 133 361
333 27.6 1.1 7.8 NP_60 73089 73451 -355528 + ZAM_I LTR/Gypsy 5600 5864 -1348 31 362
1303 18.3 8.8 2.3 NP_60 217129 217492 -211487 + Gypsy_LTR LTR/Gypsy 1 387 -95 110 363
2278 9 5.4 2.1 NP_60 190763 191135 -237844 + DIVER2_LTR LTR/Pao 1 385 0 102 372
2276 8.8 5.4 2.1 NP_60 312292 312664 -116315 + DIVER2_LTR LTR/Pao 1 385 0 156 372
2609 4.4 0.3 3 NP_60 373519 373891 -55088 + DM412 LTR/Gypsy 5763 6125 -352 187 372
2431 7.9 4.8 1.8 NP_60 162098 162471 -266508 C DIVER2_LTR LTR/Pao 0 385 1 91 373
2942 4.5 0.5 0 NP_60 318353 318729 -110250 C STALKER4_LTR LTR/Gypsy -23 379 1 160 376
1943 12.4 0.8 4.1 NP_60 61731 62109 -366870 + Gypsy-28_DYa-LTR LTR/Gypsy 1 367 0 26 378
2937 2.1 6.7 0.2 NP_60 84188 84576 -344403 + DM297_LTR LTR/Gypsy 1 414 0 37 388
2950 1.8 6.7 0.2 NP_60 120666 121054 -307925 + DM297_LTR LTR/Gypsy 1 414 0 61 388
1712 19.1 1.8 2 NP_60 224986 225376 -203603 + Gypsy_LTR LTR/Gypsy 1 390 -92 117 390
2789 4.8 0.5 4 NP_60 13362 13753 -415226 + STALKER4_LTR LTR/Gypsy 1 379 -23 5 391
2761 1.2 24.8 0 NP_60 362491 362883 -66096 C R1_DSi Non-LTR_retrotransposon/R1 -1503 3931 3441 181 392
2995 4.3 0 0 NP_60 217585 217981 -210998 + DM412 LTR/Gypsy 2672 3068 -3409 113 396
2985 2.3 3.8 0.7 NP_60 39071 39468 -389511 + DM297_LTR LTR/Gypsy 5 414 0 19 397
1178 18.1 2.5 11.7 NP_60 90369 90768 -338211 + ROVER-LTR_DM LTR/Gypsy 1 367 0 46 399
1178 18.1 2.5 11.7 NP_60 126863 127262 -301717 + ROVER-LTR_DM LTR/Gypsy 1 367 0 70 399
2451 5.8 0.7 10 NP_60 256847 257249 -171730 + Gypsy-5_DSim-LTR LTR/Gypsy 1 369 0 131 402
3166 2.9 0.7 0.7 NP_60 9828 10241 -418738 C DM297_LTR LTR/Gypsy 0 414 1 3 413
3116 3.2 0.7 1 NP_60 59167 59581 -369398 + DM412 LTR/Gypsy 1 414 0 22 414
2243 16.6 0.2 0.5 NP_60 85569 85987 -342992 C Gypsy2_I LTR/Gypsy -601 5534 5117 41 418
2258 16.3 0.2 0.5 NP_60 122049 122467 -306512 C Gypsy2_I LTR/Gypsy -601 5534 5117 65 418
2585 8.9 0.2 4.2 NP_60 273157 273577 -155402 + MDG1_I LTR/Gypsy 374 778 -5818 144 420
3371 2.6 1.6 0.2 NP_60 149868 150293 -278686 + Gypsy-1_DSe-I LTR/Gypsy 5997 6428 0 86 425
3397 2.6 1.4 0.2 NP_60 26149 26575 -402404 + Gypsy-1_DSe-I LTR/Gypsy 5997 6428 0 17 426
1642 15.9 3.1 1.3 NP_60 84577 85008 -343971 C STALKER4_I LTR/Gypsy -5642 888 389 38 431
1642 16 3 1.3 NP_60 121055 121486 -307493 C STALKER4_I LTR/Gypsy -5642 888 389 62 431
2869 11.1 0.2 0 NP_60 223124 223557 -205422 C Gypsy_I LTR/Gypsy -5562 945 511 115 433
2668 9.1 2 2.5 NP_60 303850 304290 -124689 + Gypsy-29_DWil-LTR LTR/Gypsy 1 439 0 155 440
2668 9.1 2 2.5 NP_60 310045 310485 -118494 + Gypsy-29_DWil-LTR LTR/Gypsy 1 439 0 155 440
1402 23.6 2.2 2.7 NP_60 25629 26072 -402907 + Gypsy5_I LTR/Gypsy 727 1168 -3655 16 443
1377 23.9 2.2 2.7 NP_60 149348 149791 -279188 + Gypsy16-I_Dya LTR/Gypsy 727 1168 -3655 85 443
2284 14.6 2.5 1.3 NP_60 144767 145223 -283756 + DM412B_LTR LTR/Gypsy 1 434 -137 79 456
2320 14.6 2.6 1.1 NP_60 21047 21504 -407475 + DM412B_LTR LTR/Gypsy 1 465 -106 10 457
3276 3.4 3 0 NP_60 39469 39933 -389046 + DM297_I LTR/Gypsy 1 479 -5688 19 464
2322 15.2 2.1 0.6 NP_60 80372 80846 -348133 + DM412B_LTR LTR/Gypsy 1 482 -89 34 474
2359 15.6 1.7 0.6 NP_60 116835 117311 -311668 + DM412B_LTR LTR/Gypsy 1 482 -89 58 476
2949 10.3 1.2 0.6 NP_60 426703 427181 -1798 + DM412B_LTR LTR/Gypsy 1 482 -89 214 478
1659 4.2 13.1 0.7 NP_60 208234 208713 -220266 + Gypsy-11_DSim-I LTR/Gypsy 1 795 -5569 106 479
2282 6.2 6.8 0.3 NP_60 272522 273001 -155978 + Gypsy-2_DSim-I LTR/Gypsy 3018 3580 -110 143 479
290 31.8 3 2.5 NP_60 110903 111384 -317595 + Gypsy-1_DSim-I LTR/Gypsy 1344 1530 -1277 53 481
1268 19.6 12.4 2.8 NP_60 20268 20750 -408229 + Gypsy-3_DSe-I LTR/Gypsy 670 1197 -6176 9 482
1289 19.4 12.4 2.8 NP_60 79589 80071 -348908 + Gypsy-3_DSe-I LTR/Gypsy 670 1197 -6176 33 482
1246 20 12.4 2.8 NP_60 116052 116534 -312445 + Gypsy-3_DSe-I LTR/Gypsy 670 1197 -6176 57 482
1292 19.6 12.4 2.8 NP_60 143982 144464 -284515 + Gypsy-3_DSe-I LTR/Gypsy 670 1197 -6176 78 482
2241 11.1 3.9 9.1 NP_60 398124 398610 -30369 + Gypsy8_I LTR/Gypsy 2865 3328 -1019 199 486
2814 2.9 3.2 12 NP_60 280173 280662 -148317 + Gypsy-5_DSe-LTR LTR/Gypsy 1 436 -62 145 489
2766 13.3 0.4 0.8 NP_60 423423 423922 -5057 + Gypsy-8_DSim-I LTR/Gypsy 87 584 -6012 213 499
2764 13.7 0.2 0.8 NP_60 409028 409528 -19451 + Gypsy-53_DEl-I LTR/Gypsy 87 584 -6012 208 500
3481 2.6 0.6 7.7 NP_60 373892 374394 -54585 + DM412 LTR/Gypsy 13 482 -89 189 502
2475 11.5 0.2 9.3 NP_60 401816 402321 -26658 + Gypsy8_I LTR/Gypsy 2865 3328 -1019 202 505
2563 11.1 0 9.3 NP_60 351007 351513 -77466 + Gypsy8_I LTR/Gypsy 2865 3328 -1019 177 506
2486 11.7 0 9.3 NP_60 384158 384664 -44315 + Gypsy8_I LTR/Gypsy 2865 3328 -1019 194 506
3508 3 1 7.5 NP_60 367632 368140 -60839 + DM412 LTR/Gypsy 5 482 -89 187 508
3406 4.4 0.6 7.5 NP_60 39934 40448 -388531 + DM412B_LTR LTR/Gypsy 1 482 -89 20 514
3470 3.6 0.6 7.7 NP_60 380220 380735 -48244 + DM412B_LTR LTR/Gypsy 1 482 -89 191 515
3311 6.9 0.4 3.8 NP_60 191136 191659 -237320 + Gypsy8_I LTR/Gypsy 2214 2720 -1627 98 523
280 32.4 2.7 2.3 NP_60 138424 138959 -290020 + Gypsy-1_DSim-I LTR/Gypsy 6185 6577 -585 74 535
2654 12.3 4.6 1.3 NP_60 16274 16812 -412167 C Gypsy-13_DSim-LTR LTR/Gypsy -2 769 285 8 538
1519 29.2 1.8 0.7 NP_60 13803 14353 -414626 + Gypsy-31_DYa-I LTR/Gypsy 3326 3882 -3686 6 550
1164 32.5 0.7 1.9 NP_60 59582 60147 -368832 + Gypsy-1_DSim-I LTR/Gypsy 5029 5587 -460 23 565
296 31.4 2.9 2.5 NP_60 74302 74870 -354109 + ZAM_I LTR/Gypsy 1344 1530 -1277 31 568
2466 13.6 1.5 8.1 NP_60 362873 363441 -65538 + Gypsy8_I LTR/Gypsy 2865 3310 -1037 182 568
4433 2.5 0 0.9 NP_60 315123 315692 -113287 + ACCORD2_I LTR/Gypsy 6637 7201 -11 158 569
4749 0.2 0.3 0.3 NP_60 374395 374964 -54015 + DM412 LTR/Gypsy 1 570 -5907 190 569
4802 0 0.2 0.3 NP_60 368141 368711 -60268 + DM412 LTR/Gypsy 1 570 -5907 188 570
1307 29.2 1.7 1.9 NP_60 82925 83503 -345476 + Gypsy-26_DBp-I LTR/Gypsy 2355 2932 -857 35 578
1164 29.3 1.9 3.8 NP_60 119393 119981 -308998 + Gypsy-26_DBp-I LTR/Gypsy 2355 2932 -857 59 588
3107 9.2 6.1 1.4 NP_60 86790 87395 -341584 + Gypsy-1_DSim-LTR LTR/Gypsy 1 720 -5437 45 605
3133 9.3 6.2 1.4 NP_60 123276 123881 -305098 + Gypsy-1_DSim-LTR LTR/Gypsy 1 724 -5433 69 605
3121 11.5 3.9 2.1 NP_60 189378 189990 -238989 + Gypsy8_I LTR/Gypsy 651 1274 -5256 98 612
3014 13.4 2.8 3.8 NP_60 268327 268964 -160015 + DM412 LTR/Gypsy 1 632 -5845 140 637
2284 24.8 2.5 1.4 NP_60 326105 326743 -102236 + Gypsy-31_DEl-I LTR/Gypsy 860 1505 -5321 163 638
4518 9.8 0 0 NP_60 211718 212362 -216617 + Gypsy_I LTR/Gypsy 511 1155 -5352 110 644
3301 7.1 2.9 1.6 NP_60 127274 127925 -301054 + Gypsy-1_DSim-I LTR/Gypsy 2880 3655 -3367 71 651
3258 8.3 1.7 0.8 NP_60 90780 91432 -337547 + Gypsy-1_DSim-I LTR/Gypsy 2880 3655 -3367 47 652
1745 20.2 1.7 7.5 NP_60 402410 403074 -25905 + Gypsy8_I LTR/Gypsy 4889 5231 -213 196 664
5642 2.5 0.1 0 NP_60 159664 160345 -268634 + Gypsy-1_DSe-I LTR/Gypsy 5675 6357 -71 86 681
1853 20.8 2.3 3.4 NP_60 271857 272539 -156440 + Gypsy-34_DEl-I LTR/Gypsy 3739 4408 -316 142 682
2602 13.5 4.8 3.5 NP_60 139822 140510 -288469 C Gypsy-13_DSim-LTR LTR/Gypsy -2 769 200 77 688
1448 32.6 0.7 1 NP_60 24097 24786 -404193 + Gypsy2-I_DM LTR/Gypsy 808 1495 -5050 14 689
1441 32.8 0.7 1 NP_60 147816 148505 -280474 + Gypsy2-I_DM LTR/Gypsy 808 1495 -5050 83 689
664 22.2 2.3 13.3 NP_60 409635 410349 -18630 + Gypsy-53_DEl-I LTR/Gypsy 572 1514 -4600 208 714
4834 4.5 2.6 1.1 NP_60 379516 380235 -48744 + DM412 LTR/Gypsy 5763 6477 0 189 719
4421 7.8 1.9 1.7 NP_60 186419 187142 -241837 + Gypsy-13_DSim-LTR LTR/Gypsy 1 769 -2 98 723
3623 6.3 1.3 2 NP_60 348179 348928 -80051 C R1_DSi Non-LTR_retrotransposon/R1 -3162 2272 1237 174 749
5676 3.2 8.1 0 NP_60 189988 190762 -238217 + Gypsy-13_DSim-I LTR/Gypsy 3308 4145 -1299 101 774
5134 7.1 1.3 1.2 NP_60 40449 41225 -387754 + MDG1_I LTR/Gypsy 1 778 -5818 21 776
1548 32.8 0.6 0.7 NP_60 414941 415717 -13262 + HMSBEAGLE_I LTR/Gypsy 921 2113 -4416 210 776
4664 11.2 0.1 1.7 NP_60 407996 408777 -20202 + DM412 LTR/Gypsy 1259 2100 -4369 207 781
4950 6.5 8.8 0.2 NP_60 283326 284111 -144868 + MDG1_I LTR/Gypsy 4746 5598 -998 146 785
2188 28.4 2.5 0.7 NP_60 103642 104439 -324540 + Gypsy-1_DSim-I LTR/Gypsy 2153 2964 -3545 53 797
3486 11.6 7.5 1.5 NP_60 424435 425235 -3744 + Gypsy-8_DSim-I LTR/Gypsy 3 1531 -4583 213 800
6547 2.1 2 0 NP_60 256040 256846 -172133 + Gypsy-5_DSim-I LTR/Gypsy 6340 7162 0 129 806
2875 8.9 0.7 4.4 NP_60 62110 62928 -366051 + Gypsy-28_DYa-I LTR/Gypsy 1263 1677 -6320 26 818
3800 6.6 1.8 2.4 NP_60 62929 63801 -365178 + Gypsy-1_DSim-LTR LTR/Gypsy 1 504 -18 23 872
5393 13.5 3.6 0 NP_60 187143 188021 -240958 + Gypsy_I LTR/Gypsy 4064 4974 -1533 99 878
3661 4.1 3.7 1.2 NP_60 328802 329684 -99295 + Gypsy-1_DSim-LTR LTR/Gypsy 1 522 0 162 882
7028 2.6 2.1 0.2 NP_60 403078 403972 -25007 C R1_DSi Non-LTR_retrotransposon/R1 -1092 4342 3431 203 894
6285 4.5 7.7 2.4 NP_60 177535 178435 -250544 C BATUMI_I LTR/Pao -5730 2233 1284 94 900
2087 18.3 1.4 6.5 NP_60 338761 339669 -89310 + Gypsy-13_DSim-I LTR/Gypsy 3407 3949 -398 153 908
7208 3 0 0 NP_60 209389 210301 -218678 + Gypsy-11_DSim-I LTR/Gypsy 893 1805 -4559 106 912
7331 2 2.6 0.5 NP_60 313008 313928 -115051 + ACCORD2_I LTR/Gypsy 112 1051 -6161 158 920
5103 10.4 0.2 6.2 NP_60 315909 316838 -112141 + Gypsy8_I LTR/Gypsy 2451 3328 -1019 159 929
6724 2.5 7.6 1.5 NP_60 160601 161560 -267419 C STALKER4_I LTR/Gypsy 0 6530 5512 88 959
2051 19 2.1 8.5 NP_60 363435 364442 -64537 + Gypsy8_I LTR/Gypsy 3407 5231 -213 182 1007
7462 5.8 2.2 0.1 NP_60 347123 348137 -80842 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 4394 174 1014
2027 19.1 3.7 7.2 NP_60 395051 396071 -32908 + Gypsy8_I LTR/Gypsy 3407 5231 -213 196 1020
5135 13 3.8 2.4 NP_60 145258 146283 -282696 + DM412 LTR/Gypsy 1 1040 -5437 80 1025
2121 19.3 1.5 7.1 NP_60 398699 399732 -29247 + Gypsy8_I LTR/Gypsy 3407 5231 -213 196 1033
5293 11.9 3.8 3.3 NP_60 21520 22554 -406425 + DM412 LTR/Gypsy 1 1040 -5437 11 1034
2098 19.3 1.4 7.4 NP_60 351596 352631 -76348 + Gypsy8_I LTR/Gypsy 3407 5231 -213 172 1035
2094 19.2 1.4 7.3 NP_60 381070 382105 -46874 + Gypsy8_I LTR/Gypsy 3407 5231 -213 182 1035
1045 32.8 4.5 4.1 NP_60 36958 38015 -390964 + Gypsy5_I LTR/Gypsy 4680 5921 -1241 16 1057
4963 18.2 11.3 0.5 NP_60 269388 270507 -158472 + Gypsy-34_DEl-I LTR/Gypsy 10 1250 -3474 142 1119
5825 1.8 0.9 0.4 NP_60 354182 355310 -73669 C ROO_I LTR/Pao 0 8256 7556 180 1128
10267 0.8 0 0.1 NP_60 223648 224837 -204142 + LINEJ1_DM Non-LTR_retrotransposon/Jockey 3819 5007 -13 116 1189
9737 1.8 0 0.6 NP_60 313929 315131 -113848 + ACCORD2_I LTR/Gypsy 1680 2875 -4337 158 1202
10299 0.9 0 0.5 NP_60 210420 211627 -217352 C LINEJ1_DM Non-LTR_retrotransposon/Jockey 0 5020 3819 111 1207
3249 8.6 6.4 4.6 NP_60 184549 185759 -243220 C BATUMI_I LTR/Pao -6676 1287 1 94 1210
9328 4.3 3 0.6 NP_60 257282 258496 -170483 C DIVER_I LTR/Pao -4398 1245 1 132 1214
6210 20.8 0.2 0.2 NP_60 270510 271737 -157242 + Gypsy-34_DEl-I LTR/Gypsy 1481 2708 -2016 142 1227
6143 12.8 3.9 2.4 NP_60 406657 407901 -21078 + DM412 LTR/Gypsy 1 1263 -5214 207 1244
8224 12.8 0.2 0 NP_60 188022 189297 -239682 + Gypsy_I LTR/Gypsy 5213 6490 -17 99 1275
3370 30.1 3.6 0.5 NP_60 108139 109429 -319550 + Gypsy-31_DYa-I LTR/Gypsy 3015 4344 -3224 54 1290
2363 29.5 1.4 1.8 NP_60 80822 82144 -346835 + Gypsy-26_DBp-I LTR/Gypsy 770 3336 -3599 35 1322
2439 29.5 1 1.7 NP_60 117287 118612 -310367 + Gypsy-26_DBp-I LTR/Gypsy 770 3336 -3599 59 1325
3208 31.6 0.5 0.5 NP_60 35375 36709 -392270 + Gypsy5_I LTR/Gypsy 2206 3540 -2969 16 1334
7659 4.4 3.5 1 NP_60 191725 193081 -235898 + Gypsy-11_DSim-I LTR/Gypsy 1 1053 -5494 104 1356
5811 11.7 3.9 0.9 NP_60 60301 61673 -367306 C DM412 LTR/Gypsy -246 6231 5030 25 1372
3467 29.4 3 0.5 NP_60 71522 72906 -356073 + Gypsy5_I LTR/Gypsy 2145 3564 -2945 30 1384
3339 30.5 3.4 1.3 NP_60 135693 137083 -291896 + Gypsy-31_DYa-I LTR/Gypsy 3015 4433 -3135 75 1390
1999 22.3 6.4 5.4 NP_60 316892 318294 -110685 + Gypsy-13_DSim-I LTR/Gypsy 3407 4050 -297 153 1402
6979 9.5 4.1 2.1 NP_60 225778 227185 -201794 + Gypsy-3_DSe-I LTR/Gypsy 285 1787 -4743 120 1407
4119 20.7 1.5 4 NP_60 265717 267139 -161840 + NOMAD_I LTR/Gypsy 6032 7528 -11 136 1422
3217 27.9 1.4 2 NP_60 419428 420862 -8117 + Gypsy-53_DEl-I LTR/Gypsy 2376 3801 -588 208 1434
10987 3.3 2.4 0.1 NP_60 410350 411785 -17194 + Gypsy-8_DSim-I LTR/Gypsy 3 1470 -3942 209 1435
11369 3.4 1.4 0.1 NP_60 364540 365999 -62980 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3951 184 1459
10945 4.4 2.9 0.1 NP_60 352720 354181 -74798 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3927 179 1461
9743 2.5 4.1 1.4 NP_60 153656 155138 -273841 + Gypsy-1_DSe-I LTR/Gypsy 4156 5679 -749 86 1482
12112 2.7 0.1 0.1 NP_60 366020 367512 -61467 C R1_DSi Non-LTR_retrotransposon/R1 -501 4933 3441 185 1492
12285 3 1.3 0 NP_60 411788 413358 -15621 + Gypsy-8_DSim-I LTR/Gypsy 2001 3591 -1821 209 1570
12371 3.9 0.2 0.2 NP_60 349435 351017 -77962 C R1_DSi Non-LTR_retrotransposon/R1 -411 5023 3441 176 1582
9617 14.4 0.3 0.4 NP_60 337172 338754 -90225 + Gypsy-13_DSim-I LTR/Gypsy 3720 5274 -1552 153 1582
13189 1.1 0.2 1.6 NP_60 300562 302155 -126824 + Gypsy-2_DBp-I LTR/Gypsy 2742 4313 -875 154 1593
2466 18.9 1.4 7.9 NP_60 345409 347034 -81945 + Gypsy8_I LTR/Gypsy 2868 5231 -213 172 1625
2498 19 1.4 8 NP_60 341725 343354 -85625 + Gypsy8_I LTR/Gypsy 2865 5231 -213 169 1629
13376 3.5 0.2 0.1 NP_60 302155 303848 -125131 + Gypsy-13_DSim-I LTR/Gypsy 626 2321 -3123 153 1693
11067 3.4 1.4 4.6 NP_60 368713 370421 -58558 + DM412 LTR/Gypsy 510 2165 -4312 187 1708
11975 3.9 4.3 1.9 NP_60 421469 423206 -5773 + Gypsy-8_DSim-I LTR/Gypsy 3577 5355 -57 212 1737
11598 11.5 0.7 0.1 NP_60 326751 328521 -100458 + Gypsy-1_DSe-I LTR/Gypsy 1100 2882 -3546 164 1770
14059 3.1 2.1 0 NP_60 310498 312291 -116688 + Gypsy-13_DSim-I LTR/Gypsy 2314 4145 -1299 153 1793
14971 4 0.1 0.1 NP_60 2828 4668 -424311 C NOMAD_I LTR/Gypsy -1689 4883 3044 2 1840
15729 2.9 0.8 0.1 NP_60 343443 345409 -83570 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3449 171 1966
15843 2.7 0.8 0.1 NP_60 382194 384168 -44811 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3441 193 1974
15857 2.5 0.8 0.1 NP_60 396160 398134 -30845 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3441 198 1974
15934 2.8 0.6 0.1 NP_60 339758 341735 -87244 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3441 168 1977
15799 3.4 0.8 0.1 NP_60 29352 31333 -397646 + Gypsy-1_DSe-I LTR/Gypsy 2751 4745 -1683 17 1981
16133 2.3 0.9 0 NP_60 200875 202856 -226123 + DMCR1A Non-LTR_retrotransposon/CR1 2491 4560 0 107 1981
15369 3 0.8 1.6 NP_60 399821 401829 -27150 C R1_DSi Non-LTR_retrotransposon/R1 -5 5429 3438 201 2008
10475 4.9 4.2 0.1 NP_60 291964 293982 -134997 C MDG1_I LTR/Gypsy -3330 3266 1164 151 2018
16035 0.8 0.5 1.4 NP_60 374966 376988 -51991 + DM412 LTR/Gypsy 510 2514 -3963 189 2022
16823 1.9 0.7 0.9 NP_60 232714 234869 -194110 + Gypsy-3_DSe-I LTR/Gypsy 4354 6504 -26 120 2155
18509 2.2 1.4 0 NP_60 403971 406255 -22724 C R1_DSi Non-LTR_retrotransposon/R1 -626 4808 2493 204 2284
12959 4.8 4.2 0.2 NP_60 281022 283328 -145651 + MDG1_I LTR/Gypsy 1235 3631 -2965 146 2306
18631 3 0.3 0.6 NP_60 198563 200886 -228093 + DMCR1A Non-LTR_retrotransposon/CR1 2 2319 -2151 107 2323
6095 15.3 6.3 3.5 NP_60 462 2824 -426155 C NOMAD_I LTR/Gypsy -6 7533 4991 2 2362
16177 6.1 1.2 3.3 NP_60 392628 395013 -33966 + Gypsy12_LTR LTR/Gypsy 1 2336 0 195 2385
19367 3.5 1.5 0.1 NP_60 26899 29356 -399623 + Gypsy-1_DSe-I LTR/Gypsy 1 2491 -3937 17 2457
20221 2.7 0.1 0.1 NP_60 376999 379514 -49465 + DM412 LTR/Gypsy 2703 5218 -1259 189 2515
19575 3.4 0.7 0.3 NP_60 100210 102838 -326141 + Gypsy-1_DSim-I LTR/Gypsy 4069 6705 -317 52 2628
12043 20.6 2.1 0.7 NP_60 10667 13360 -415619 + Gypsy5_I LTR/Gypsy 911 3642 -2867 4 2693
22282 3 1.5 0.1 NP_60 150616 153416 -275563 + Gypsy-1_DSe-I LTR/Gypsy 1 2840 -3588 86 2800
21372 3.5 0.2 0.2 NP_60 104439 107273 -321706 + Gypsy-1_DSim-I LTR/Gypsy 3871 6705 -317 53 2834
21372 3.4 0.4 0.2 NP_60 128998 131846 -297133 C Gypsy-1_DSim-I LTR/Gypsy -317 6705 3853 73 2848
21425 3.3 0.3 0.3 NP_60 92506 95356 -333623 C Gypsy-1_DSim-I LTR/Gypsy -317 6705 3853 49 2850
22001 3.5 0.4 0.3 NP_60 131886 134828 -294151 + Gypsy-1_DSim-I LTR/Gypsy 3760 6705 -317 74 2942
8590 8.8 1.7 0.8 NP_60 87396 90368 -338611 + Gypsy-1_DSim-I LTR/Gypsy 6 3761 -2396 45 2972
8478 8.6 1.6 1 NP_60 123881 126862 -302117 + Gypsy-1_DSim-I LTR/Gypsy 6 3761 -2396 69 2981
25648 0.6 0.3 0 NP_60 370473 373517 -55462 + DM412 LTR/Gypsy 2166 5218 -1259 187 3044
9724 6.3 0.8 2.5 NP_60 63828 66977 -362002 + Gypsy-1_DSim-I LTR/Gypsy 26 3260 -3762 27 3149
17356 11.9 0.9 1.9 NP_60 162768 166182 -262797 C BATUMI_I LTR/Pao -2688 5601 2010 92 3414
26442 2.2 1.1 0.3 NP_60 67280 70716 -358263 + Gypsy-1_DSim-I LTR/Gypsy 3240 6705 -317 29 3436
7860 26.8 1.1 0.9 NP_60 415897 419398 -9581 + Gypsy-53_DEl-I LTR/Gypsy 1 5159 -1386 208 3501
35099 1 0.1 0 NP_60 155342 159460 -269519 + Copia1-I_DM LTR/Copia 1 4124 0 87 4118
16013 9.1 0.5 0.9 NP_60 95745 100202 -328777 + Jockey-1_DSe Non-LTR_retrotransposon/Jockey 1 4346 0 51 4457
38875 0.3 0.1 0.1 NP_60 227464 232056 -196923 + Copia_I LTR/Copia 1 4593 0 121 4592
31309 12 1.1 0.1 NP_60 212345 217128 -211851 + Gypsy_I LTR/Gypsy 1677 6507 0 110 4783
29591 11.5 1.6 0 NP_60 218042 223127 -205852 C Gypsy_I LTR/Gypsy -276 6231 1063 115 5085
40455 2.4 1.4 0.1 NP_60 4653 9827 -419152 C DM297_I LTR/Gypsy -929 5238 1 3 5174
44214 2.7 0.7 0 NP_60 202857 208233 -220746 + Gypsy-11_DSim-I LTR/Gypsy 1133 6547 0 106 5376
42883 1.1 0.2 0.2 NP_60 193076 198457 -230522 C I_DM Non-LTR_retrotransposon/I -9 5365 1 105 5381
46351 1 0.3 0 NP_60 178797 184187 -244792 + BEL_I LTR/Pao 1 5404 0 95 5390
44480 2.3 0.8 0.5 NP_60 53499 59166 -369813 + DM297_I LTR/Gypsy 480 6167 0 22 5667
40297 4 0.5 1 NP_60 41226 46968 -382011 + DM412 LTR/Gypsy 1 6477 0 21 5742
45485 2.6 0.8 0.6 NP_60 304291 310044 -118935 + Gypsy-29_DWil-I LTR/Gypsy 1 5762 0 155 5753
43919 5.5 1.9 1.1 NP_60 259817 265710 -163269 + NOMAD_I LTR/Gypsy 1 5940 -632 136 5893
26879 7.1 0.9 1.1 NP_60 294497 300561 -128418 + Gypsy-2_DBp-I LTR/Gypsy 1 5188 0 154 6064
45869 3.1 0.8 0.8 NP_60 318730 324808 -104171 C STALKER4_I LTR/Gypsy 0 6530 379 160 6078
42956 3.7 1.8 0.6 NP_60 249187 255525 -173454 + Gypsy-3_DSe-I LTR/Gypsy 764 7179 -194 126 6338
51431 3.5 0.8 0.5 NP_60 242583 248980 -179999 + Gypsy-3_DSe-I LTR/Gypsy 764 7179 -194 124 6397
16492 19.6 1.4 1.9 NP_60 284993 291428 -137551 + Gypsy10_I LTR/Gypsy 1 6736 -218 149 6435
40098 4.6 0.6 1.1 NP_60 46969 53498 -375481 + DM412 LTR/Gypsy 1 6477 0 22 6529
47803 2.8 0.6 0.5 NP_60 273594 280184 -148795 + Gypsy-5_DSe-I LTR/Gypsy 1 6164 0 145 6590
53828 4 1.5 0.8 NP_60 235296 242373 -186606 + Gypsy-3_DSe-I LTR/Gypsy 1 7179 -194 120 7077
56260 0.4 0.8 0.3 NP_60 355310 362490 -66489 C ROO_I LTR/Pao -1470 6786 1 180 7180
55815 2.4 0.5 0.2 NP_60 329685 336937 -92042 + Gypsy-1_DSim-I LTR/Gypsy 1 7021 -1 162 7252
40567 4.1 0.7 1.7 NP_60 384720 392624 -36355 + Gypsy12_I LTR/Gypsy 1 5541 -5 195 7904
769 1.9 0.4 1.3 NP_60 166190 177551 -251428 C 15mer_SAT Satellite/Satellite -5 11264 1 93 11361