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ld: file not found: /usr/lib/system/libsystem_darwin.dylib for architecture x86_64 #24

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pddg opened this issue Mar 16, 2018 · 2 comments
Open

ld: file not found: /usr/lib/system/libsystem_darwin.dylib for architecture x86_64 #24

pddg opened this issue Mar 16, 2018 · 2 comments

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@pddg
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pddg commented Mar 16, 2018

環境

  • Python 3.6
  • macOS 10.12.6
  • Xcode 9.2 (9C40b)

発生したエラー

pip install student_portal_crawler
Collecting student_portal_crawler
  Downloading student_portal_crawler-0.1.0a1-py3-none-any.whl
Collecting lxml>=4.0.0 (from student_portal_crawler)
  Downloading lxml-4.2.0.tar.gz (4.3MB)
    100% |████████████████████████████████| 4.3MB 345kB/s
Collecting beautifulsoup4>=4.5.0 (from student_portal_crawler)
  Using cached beautifulsoup4-4.6.0-py3-none-any.whl
Collecting requests>=2.15.0 (from student_portal_crawler)
  Using cached requests-2.18.4-py2.py3-none-any.whl
Collecting urllib3<1.23,>=1.21.1 (from requests>=2.15.0->student_portal_crawler)
  Using cached urllib3-1.22-py2.py3-none-any.whl
Collecting idna<2.7,>=2.5 (from requests>=2.15.0->student_portal_crawler)
  Using cached idna-2.6-py2.py3-none-any.whl
Collecting certifi>=2017.4.17 (from requests>=2.15.0->student_portal_crawler)
  Using cached certifi-2018.1.18-py2.py3-none-any.whl
Collecting chardet<3.1.0,>=3.0.2 (from requests>=2.15.0->student_portal_crawler)
  Using cached chardet-3.0.4-py2.py3-none-any.whl
Installing collected packages: lxml, beautifulsoup4, urllib3, idna, certifi, chardet, requests, student-portal-crawler
  Running setup.py install for lxml ... error
    Complete output from command /Users/pudding/test/venv/bin/python3 -u -c "import setuptools, tokenize;__file__='/private/var/folders/gs/3l6zlz4s0x51clkppzd_pfw80000gn/T/pip-build-o8evwk67/lxml/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /var/folders/gs/3l6zlz4s0x51clkppzd_pfw80000gn/T/pip-yqhsjg19-record/install-record.txt --single-version-externally-managed --compile --install-headers /Users/pudding/test/venv/include/site/python3.6/lxml:
    Building lxml version 4.2.0.
    Building without Cython.
    Using build configuration of libxslt 1.1.29
    Building against libxml2/libxslt in the following directory: /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/usr/lib
    running install
    running build
    running build_py
    creating build
    creating build/lib.macosx-10.12-x86_64-3.6
    creating build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/__init__.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/_elementpath.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/builder.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/cssselect.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/doctestcompare.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/ElementInclude.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/pyclasslookup.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/sax.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/usedoctest.py -> build/lib.macosx-10.12-x86_64-3.6/lxml
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/__init__.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/__init__.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/_diffcommand.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/_html5builder.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/_setmixin.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/builder.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/clean.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/defs.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/diff.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/ElementSoup.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/formfill.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/html5parser.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/soupparser.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    copying src/lxml/html/usedoctest.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/html
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron
    copying src/lxml/isoschematron/__init__.py -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron
    copying src/lxml/etree.h -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/etree_api.h -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/lxml.etree.h -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/lxml.etree_api.h -> build/lib.macosx-10.12-x86_64-3.6/lxml
    copying src/lxml/includes/__init__.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/c14n.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/config.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/dtdvalid.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/etreepublic.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/htmlparser.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/relaxng.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/schematron.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/tree.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/uri.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/xinclude.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/xmlerror.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/xmlparser.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/xmlschema.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/xpath.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/xslt.pxd -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/etree_defs.h -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    copying src/lxml/includes/lxml-version.h -> build/lib.macosx-10.12-x86_64-3.6/lxml/includes
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/rng
    copying src/lxml/isoschematron/resources/rng/iso-schematron.rng -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/rng
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl
    copying src/lxml/isoschematron/resources/xsl/RNG2Schtrn.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl
    copying src/lxml/isoschematron/resources/xsl/XSD2Schtrn.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl
    creating build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_abstract_expand.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_dsdl_include.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_message.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_skeleton_for_xslt1.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_svrl_for_xslt1.xsl -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/readme.txt -> build/lib.macosx-10.12-x86_64-3.6/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
    running build_ext
    building 'lxml.etree' extension
    creating build/temp.macosx-10.12-x86_64-3.6
    creating build/temp.macosx-10.12-x86_64-3.6/src
    creating build/temp.macosx-10.12-x86_64-3.6/src/lxml
    clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -DCYTHON_CLINE_IN_TRACEBACK=0 -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/usr/include/libxml2 -Isrc -Isrc/lxml/includes -I/Users/pudding/test/venv/include -I/usr/local/var/pyenv/versions/3.6.0/Python.framework/Versions/3.6/include/python3.6m -I/usr/local/var/pyenv/versions/3.6.0/include/python3.6m -c src/lxml/etree.c -o build/temp.macosx-10.12-x86_64-3.6/src/lxml/etree.o -w -flat_namespace
    clang -bundle -undefined dynamic_lookup -L/usr/local/opt/readline/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/openssl/lib -L/usr/local/var/pyenv/versions/3.6.0/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/readline/lib -L/usr/local/opt/openssl/lib -L/usr/local/var/pyenv/versions/3.6.0/lib build/temp.macosx-10.12-x86_64-3.6/src/lxml/etree.o -L/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk/usr/lib -lxslt -lexslt -lxml2 -lz -lm -o build/lib.macosx-10.12-x86_64-3.6/lxml/etree.cpython-36m-darwin.so
    ld: file not found: /usr/lib/system/libsystem_darwin.dylib for architecture x86_64
    clang: error: linker command failed with exit code 1 (use -v to see invocation)
    error: command 'clang' failed with exit status 1

    ----------------------------------------
Command "/Users/pudding/test/venv/bin/python3 -u -c "import setuptools, tokenize;__file__='/private/var/folders/gs/3l6zlz4s0x51clkppzd_pfw80000gn/T/pip-build-o8evwk67/lxml/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /var/folders/gs/3l6zlz4s0x51clkppzd_pfw80000gn/T/pip-yqhsjg19-record/install-record.txt --single-version-externally-managed --compile --install-headers /Users/pudding/test/venv/include/site/python3.6/lxml" failed with error code 1 in /private/var/folders/gs/3l6zlz4s0x51clkppzd_pfw80000gn/T/pip-build-o8evwk67/lxml/

インストール時に上記のエラーでこける

回避策

$ pip install lxml==4.1.1
@pddg
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pddg commented Mar 16, 2018

https://bugs.launchpad.net/lxml/+bug/1727864

@pddg
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pddg commented Mar 16, 2018

lxmlに今出てるプルリクエストが通れば修復されそう

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