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External_SIRF.cmake
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External_SIRF.cmake
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#========================================================================
# Author: Benjamin A Thomas
# Author: Kris Thielemans
# Copyright 2017 University College London
#
# This file is part of the CCP PETMR Synergistic Image Reconstruction Framework (SIRF) SuperBuild.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0.txt
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
#=========================================================================
#This needs to be unique globally
set(proj SIRF)
# Set dependency list
if (${BUILD_NiftyReg})
set(${proj}_DEPENDENCIES "STIR;Boost;HDF5;ISMRMRD;FFTW3;SWIG;NiftyReg")
else()
set(${proj}_DEPENDENCIES "STIR;Boost;HDF5;ISMRMRD;FFTW3;SWIG")
endif()
message(STATUS "Matlab_ROOT_DIR=" ${Matlab_ROOT_DIR})
message(STATUS "STIR_DIR=" ${STIR_DIR})
message(STATUS "NiftyReg_Binary_DIR=" ${NiftyReg_Binary_DIR})
# Include dependent projects if any
ExternalProject_Include_Dependencies(${proj} DEPENDS_VAR ${proj}_DEPENDENCIES)
# Set external name (same as internal for now)
set(externalProjName ${proj})
set(${proj}_SOURCE_DIR "${SOURCE_ROOT_DIR}/${proj}" )
set(${proj}_BINARY_DIR "${SUPERBUILD_WORK_DIR}/builds/${proj}/build" )
set(${proj}_DOWNLOAD_DIR "${SUPERBUILD_WORK_DIR}/downloads/${proj}" )
set(${proj}_STAMP_DIR "${SUPERBUILD_WORK_DIR}/builds/${proj}/stamp" )
set(${proj}_TMP_DIR "${SUPERBUILD_WORK_DIR}/builds/${proj}/tmp" )
if(NOT ( DEFINED "USE_SYSTEM_${externalProjName}" AND "${USE_SYSTEM_${externalProjName}}" ) )
message(STATUS "${__indent}Adding project ${proj}")
### --- Project specific additions here
set(SIRF_Install_Dir ${SUPERBUILD_INSTALL_DIR})
option(BUILD_TESTING_${proj} "Build tests for ${proj}" ON)
message(STATUS "HDF5_ROOT in External_SIRF: " ${HDF5_ROOT})
set(CMAKE_LIBRARY_PATH ${CMAKE_LIBRARY_PATH} ${SUPERBUILD_INSTALL_DIR})
ExternalProject_Add(${proj}
${${proj}_EP_ARGS}
GIT_REPOSITORY ${${proj}_URL}
GIT_TAG ${${proj}_TAG}
SOURCE_DIR ${${proj}_SOURCE_DIR}
BINARY_DIR ${${proj}_BINARY_DIR}
DOWNLOAD_DIR ${${proj}_DOWNLOAD_DIR}
STAMP_DIR ${${proj}_STAMP_DIR}
TMP_DIR ${${proj}_TMP_DIR}
CMAKE_ARGS
-DCMAKE_PREFIX_PATH=${SUPERBUILD_INSTALL_DIR}
-DCMAKE_LIBRARY_PATH=${SUPERBUILD_INSTALL_DIR}/lib
-DCMAKE_INSTALL_PREFIX=${SIRF_Install_Dir}
-DBOOST_INCLUDEDIR=${BOOST_ROOT}/include/
-DBOOST_LIBRARYDIR=${BOOST_LIBRARY_DIR}
-DBOOST_ROOT=${BOOST_ROOT}
-DMatlab_ROOT_DIR=${Matlab_ROOT_DIR}
-DMATLAB_ROOT=${Matlab_ROOT_DIR} # pass this for compatibility with old SIRF
-DMATLAB_DEST_DIR=${MATLAB_DEST_DIR}
-DSTIR_DIR=${STIR_DIR}
-DHDF5_ROOT=${HDF5_ROOT}
-DHDF5_INCLUDE_DIRS=${HDF5_INCLUDE_DIRS}
-DISMRMRD_DIR=${ISMRMRD_DIR}
-DSWIG_EXECUTABLE=${SWIG_EXECUTABLE}
-DPYTHON_EXECUTABLE=${PYTHON_EXECUTABLE}
-DPYTHON_INCLUDE_DIR=${PYTHON_INCLUDE_DIRS}
-DPYTHON_LIBRARY=${PYTHON_LIBRARIES}
-DPYTHON_DEST_DIR=${PYTHON_DEST_DIR}
-DPYTHON_STRATEGY=${PYTHON_STRATEGY}
-DNiftyReg_Binary_DIR=${NiftyReg_Binary_DIR}
-DFFTW3F_LIBRARY=${FFTW3F_LIBRARY}
-DFFTW3_INCLUDE_DIR=${FFTW3_INCLUDE_DIR}
INSTALL_DIR ${SIRF_Install_Dir}
DEPENDS
${${proj}_DEPENDENCIES}
)
set(SIRF_ROOT ${SIRF_SOURCE_DIR})
set(SIRF_INCLUDE_DIR ${SIRF_SOURCE_DIR})
#if (BUILD_TESTING_${proj})
add_test(NAME ${proj}_TESTS
COMMAND ${CMAKE_CTEST_COMMAND} -C $<CONFIGURATION>
WORKING_DIRECTORY ${${proj}_BINARY_DIR})
#endif()
else()
if(${USE_SYSTEM_${externalProjName}})
find_package(${proj} ${${externalProjName}_REQUIRED_VERSION} REQUIRED)
message(STATUS "USING the system ${externalProjName}, set ${externalProjName}_DIR=${${externalProjName}_DIR}")
endif()
ExternalProject_Add_Empty(${proj} DEPENDS "${${proj}_DEPENDENCIES}"
SOURCE_DIR ${${proj}_SOURCE_DIR}
BINARY_DIR ${${proj}_BINARY_DIR}
DOWNLOAD_DIR ${${proj}_DOWNLOAD_DIR}
STAMP_DIR ${${proj}_STAMP_DIR}
TMP_DIR ${${proj}_TMP_DIR}
)
endif()
mark_as_superbuild(
VARS
${externalProjName}_DIR:PATH
LABELS
"FIND_PACKAGE"
)