Release-0.8.1

Finish Release-0.8.1

Release-0.8

Finish Release-0.8

V0.6.0

Added process logging to file functionality for AMP.  Updated README …

…to describe how to use new interface.

v0.5.1

Updates to version number and README

Draft 2 - V0.5.0

Added ALLPATHs-LG

Enabled running a range of assemblies varying coverage. Makes use a a tool called "Subsampler" to handle subsampling of reads when the assembler cannot do this itself.

Change job configuration format from "ini" style to "xml" style. Please run RAMPART once, then see "~/.tgac/rampart/config" directory for an example job configuration file and an xml schema describe valid syntax.

v0.4.1 - First Public Release

This is the first public release of RAMPART. Please consult the README file for details on how to install and setup RAMPART. In particular you must do the following before running RAMPART:

Either:

• Install conanx (2.5-X-0.4.1) into your local maven repo
• Install TgacConanProcs (0.4.1) into your local maven repo
• Install RAMPART and use shaded executable jar (will contain conanx and TgacConanProcs)

Or:

• Use the attached executable jar, which already contains TgacConanProcs and ConanX.

Then add a new ~/.tgac/rampart/conan.properties file that describes your configuration if you wish to exploit a HPC cluster with scheduling system.

See RAMPART README file for more details.