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Session_info-2018-04-19.txt
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Session_info-2018-04-19.txt
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Session info ------------------------------------------------------------------------------
setting value
version R version 3.4.4 (2018-03-15)
system x86_64, darwin15.6.0
ui AQUA
language (EN)
collate en_GB.UTF-8
tz Australia/Brisbane
date 2018-04-19
Packages ----------------------------------------------------------------------------------
package * version date source
acepack 1.4.1 2016-10-29 CRAN (R 3.4.0)
ade4 1.7-11 2018-04-05 cran (@1.7-11)
animation 2.5 2017-03-30 CRAN (R 3.4.0)
ape * 5.1 2018-04-04 cran (@5.1)
backports 1.1.0 2017-05-22 CRAN (R 3.4.0)
base * 3.4.4 2018-03-15 local
base64enc 0.1-3 2015-07-28 CRAN (R 3.4.0)
checkmate 1.8.3 2017-07-03 CRAN (R 3.4.1)
checkpoint * 0.4.3 2017-12-19 CRAN (R 3.4.3)
cluster 2.0.6 2017-03-10 CRAN (R 3.4.4)
clusterGeneration 1.3.4 2015-02-18 cran (@1.3.4)
coda 0.19-1 2016-12-08 cran (@0.19-1)
colorspace 1.3-2 2016-12-14 CRAN (R 3.4.0)
combinat 0.0-8 2012-10-29 CRAN (R 3.4.0)
compiler 3.4.4 2018-03-15 local
data.table 1.10.4 2017-02-01 CRAN (R 3.4.0)
datasets * 3.4.4 2018-03-15 local
deSolve 1.14 2016-09-05 CRAN (R 3.4.0)
devtools * 1.13.5 2018-02-18 CRAN (R 3.4.3)
digest 0.6.15 2018-01-28 CRAN (R 3.4.3)
dispRity * 1.0.3 2018-03-22 CRAN (R 3.4.4)
expm 0.999-2 2017-03-29 cran (@0.999-2)
fastmatch 1.1-0 2017-01-28 cran (@1.1-0)
foreign 0.8-69 2017-06-22 CRAN (R 3.4.4)
Formula 1.2-2 2017-07-10 CRAN (R 3.4.1)
geiger 2.0.6 2015-09-07 CRAN (R 3.4.0)
geometry 0.3-6 2015-09-09 cran (@0.3-6)
ggplot2 2.2.1 2016-12-30 CRAN (R 3.4.0)
graphics * 3.4.4 2018-03-15 local
grDevices * 3.4.4 2018-03-15 local
grid 3.4.4 2018-03-15 local
gridExtra 2.2.1 2016-02-29 CRAN (R 3.4.0)
gtable 0.2.0 2016-02-26 cran (@0.2.0)
Hmisc 4.0-3 2017-05-02 CRAN (R 3.4.0)
htmlTable 1.9 2017-01-26 CRAN (R 3.4.0)
htmltools 0.3.6 2017-04-28 cran (@0.3.6)
htmlwidgets 1.0 2018-01-20 CRAN (R 3.4.3)
igraph 1.1.2 2017-07-21 cran (@1.1.2)
knitr 1.19 2018-01-29 cran (@1.19)
lattice 0.20-35 2017-03-25 CRAN (R 3.4.4)
latticeExtra 0.6-28 2016-02-09 CRAN (R 3.4.0)
lazyeval 0.2.1 2017-10-29 cran (@0.2.1)
lme4 * 1.1-13 2017-04-19 CRAN (R 3.4.0)
lmerTest * 2.0-33 2016-12-03 CRAN (R 3.4.0)
magic 1.5-6 2013-11-20 cran (@1.5-6)
magrittr 1.5 2014-11-22 cran (@1.5)
maps 3.3.0 2018-04-03 cran (@3.3.0)
MASS 7.3-49 2018-02-23 CRAN (R 3.4.4)
Matrix * 1.2-12 2017-11-30 CRAN (R 3.4.4)
memoise 1.1.0 2017-04-21 CRAN (R 3.4.0)
methods * 3.4.4 2018-03-15 local
mgcv 1.8-23 2018-01-21 CRAN (R 3.4.4)
minqa 1.2.4 2014-10-09 CRAN (R 3.4.0)
mnormt 1.5-5 2016-10-15 cran (@1.5-5)
munsell 0.4.3 2016-02-13 cran (@0.4.3)
mvtnorm 1.0-7 2018-01-25 cran (@1.0-7)
nlme 3.1-131.1 2018-02-16 CRAN (R 3.4.4)
nloptr 1.0.4 2014-08-04 CRAN (R 3.4.0)
nnet 7.3-12 2016-02-02 CRAN (R 3.4.4)
numDeriv 2016.8-1 2016-08-27 cran (@2016.8-)
paleotree 3.0.0 2018-04-12 Github (dwbapst/paleotree@1b6e244)
parallel 3.4.4 2018-03-15 local
permute 0.9-4 2016-09-09 CRAN (R 3.4.0)
phangorn 2.4.0 2018-02-15 cran (@2.4.0)
phyclust 0.1-22 2017-12-02 cran (@0.1-22)
phytools 0.6-58 2018-03-15 Github (liamrevell/phytools@9ddeead)
pkgconfig 2.0.1 2017-03-21 cran (@2.0.1)
plotrix 3.7 2017-12-07 cran (@3.7)
plyr 1.8.4 2016-06-08 CRAN (R 3.4.0)
quadprog 1.5-5 2013-04-17 cran (@1.5-5)
RColorBrewer 1.1-2 2014-12-07 cran (@1.1-2)
Rcpp 0.12.16 2018-03-13 cran (@0.12.16)
rlang 0.2.0 2018-02-20 cran (@0.2.0)
rpart 4.1-13 2018-02-23 CRAN (R 3.4.4)
rstudioapi 0.7 2017-09-07 CRAN (R 3.4.1)
scales 0.5.0 2017-08-24 CRAN (R 3.4.1)
scatterplot3d 0.3-41 2018-03-14 cran (@0.3-41)
splines 3.4.4 2018-03-15 local
stats * 3.4.4 2018-03-15 local
stringi 1.1.6 2017-11-17 cran (@1.1.6)
stringr 1.3.0 2018-02-19 cran (@1.3.0)
subplex 1.2-2 2016-11-19 CRAN (R 3.4.0)
survival 2.41-3 2017-04-04 CRAN (R 3.4.4)
tibble 1.3.4 2017-08-22 CRAN (R 3.4.1)
tools 3.4.4 2018-03-15 local
utils * 3.4.4 2018-03-15 local
vegan 2.5-1 2018-04-14 CRAN (R 3.4.4)
withr 2.1.1 2017-12-19 CRAN (R 3.4.3)