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non-CURIE result #6

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saramsey opened this issue Jul 7, 2020 · 3 comments
Open

non-CURIE result #6

saramsey opened this issue Jul 7, 2020 · 3 comments
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@saramsey
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saramsey commented Jul 7, 2020

The edge normalizer is working great! Thank you!

One curious thing. This query:

 curl -X GET 'https://edgenormalization-sri.renci.org/resolve_predicate?version=latest&predicate=NCIT:R100' -H "accept: application/json"

returns a somewhat unexpected result. Note that the identifier is not a CURIE ID:

{"NCIT:R100":
  {"identifier":"disease_or_phenotypic_feature_association_to_location_association",
   "label":"disease_or_phenotypic_feature_association_to_location_association"}}
@cbizon
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cbizon commented Jul 8, 2020

Thanks for the report, we'll take a look.

@cbizon cbizon self-assigned this Jul 8, 2020
@cbizon
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cbizon commented Jul 8, 2020

There's a couple of things going on here related to associations and slots. R100 maps to an association, but what we want to return is a slot_uri. So working on what the response ought to be. Just out of curiosity, @saramsey where do you pull an NCIT:R100 edge from (or is this an assignment that you're making?)

@cbizon
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cbizon commented Jul 20, 2020

Will be resolved via biolink/biolink-model#391

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