Issue #5 added github actions CI

.coveralls.yml

@@ -0,0 +1 @@
+repo_token: DtQcYGAe3jLrJRcrzliM3lstQJiqIP930

.github/workflows/ci.yml

@@ -0,0 +1,109 @@
+# CI for this library is a bit tricky, as an working display/GFX card is
+# expected to do the rendering. We use a fake display for Windows/Linux, and
+# don't run CI on Mac. Running tests locally is simpler!
+on: push
+
+jobs:
+  test:
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest, windows-latest, macos-latest]
+        python-ver: [3.6, 3.7]
+        experimental: [false]
+        include:
+          - python-ver: 3.8
+            os: ubuntu-latest
+            experimental: true
+          - python-ver: 3.8
+            os: windows-latest
+            experimental: true
+          - python-ver: 3.8
+            os: macos-latest
+            experimental: true
+
+    runs-on: ${{ matrix.os }}
+    continue-on-error: ${{ matrix.experimental }}
+
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up Python
+        uses: actions/setup-python@v1
+        with:
+          python-version: ${{ matrix.python-ver }}
+
+      # VTK uses OpenGL 2.0, but the windows Server version used on
+      # GitHub actions only has 1.1, so need to setup software rendering
+      # with Mesa.
+      # https://github.com/pal1000/mesa-dist-win
+      - name: Setup Mesa (Windows)
+        if: matrix.os == 'windows-latest'
+        run: |
+          curl --output mesa.7z -L https://github.com/pal1000/mesa-dist-win/releases/download/20.1.1-2/mesa3d-20.1.1-release-mingw.7z
+          7z x mesa.7z -omesa -y
+
+          # The script requires user input (choice of options) so need to
+          # fiddle to get it to run automatically. Not a clean way to do it,
+          # but works.
+          sed -i 's/@echo Please make a deployment choice:/@GOTO desktopgl/g' mesa\systemwidedeploy.cmd
+          sed -i 's/@echo Desktop OpenGL drivers deploy complete./@exit/g' mesa\systemwidedeploy.cmd
+          mesa\systemwidedeploy.cmd
+
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install pip-tools
+          pip-compile requirements-dev.txt
+          pip install -r requirements-dev.txt
+
+      - name: Run tests using xvfb (Ubuntu)
+        if: startsWith(matrix.os, 'ubuntu')
+        run: |
+          sudo apt-get install xvfb libxkbcommon-x11-0
+          sudo Xvfb :1 -screen 0 1024x768x24 </dev/null &
+          export DISPLAY=":1"
+          export LD_LIBRARY_PATH=$pythonLocation"/lib/python3.6/site-packages/PySide2/Qt/plugins/platfoms"
+          coverage erase
+          coverage run -a --source ./sksurgeryeval -m pytest
+          coverage report -m
+
+      - name: Run tests Windows/Mac
+        if: contains(matrix.os, 'o')
+        run: |
+          coverage erase
+          coverage run -a --source ./sksurgeryeval -m pytest
+          coverage report -m
+
+      - name: Linting
+        run: |
+          pylint --rcfile=tests/pylintrc sksurgeryeval
+
+      - name: Run coveralls
+        run: |
+          coveralls
+
+  deploy:
+    runs-on: ubuntu-18.04
+    needs: test
+    steps:
+      - uses: actions/checkout@v2
+      - uses: actions/checkout@master
+      - name: Set up Python
+        uses: actions/setup-python@v1
+        with:
+          # TODO: python version for deploy?
+          python-version: 3.6
+
+      - name: Install dependencies
+        run: python -m pip install wheel twine setuptools
+
+      - name: Build wheel
+        run: |
+          python setup.py sdist bdist_wheel
+
+      - name: Publish package if tagged release
+        if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
+        uses: pypa/gh-action-pypi-publish@master
+        with:
+          user: __token__
+          password: ${{ secrets.PYPI_API_TOKEN }}

requirements-dev.txt

@@ -14,3 +14,5 @@ sphinx_rtd_theme
 pyinstaller
 pytest
 tox
+coveralls
+pyyaml

setup.py

@@ -17,7 +17,7 @@
     description='A python library for performing surgical skills evaluation',
     long_description=long_description,
     long_description_content_type='text/x-rst',
-    url='https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-evaluation',
+    url='https://github.com/UCL/scikit-surgery-evaluation',
     author='Stephen Thompson',
     author_email='YOUR-EMAIL@ucl.ac.uk',
     license='BSD-3 license',
@@ -52,7 +52,7 @@
     ),
 
     install_requires=[
-        'numpy>=1.11',
+        'numpy',
         'ipykernel',
         'nbsphinx',
         'vtk',