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wres.vs.idv.bw.R
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wres.vs.idv.bw.R
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# Xpose 4
# An R-based population pharmacokinetic/
# pharmacodynamic model building aid for NONMEM.
# Copyright (C) 1998-2004 E. Niclas Jonsson and Mats Karlsson.
# Copyright (C) 2005-2008 Andrew C. Hooker, Justin J. Wilkins,
# Mats O. Karlsson and E. Niclas Jonsson.
# Copyright (C) 2009-2010 Andrew C. Hooker, Mats O. Karlsson and
# E. Niclas Jonsson.
# This file is a part of Xpose 4.
# Xpose 4 is free software; you can redistribute it and/or
# modify it under the terms of the GNU Lesser General Public License
# as published by the Free Software Foundation, either version 3
# of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
# You should have received a copy of the GNU Lesser General Public License
# along with this program. A copy can be cound in the R installation
# directory under \share\licenses. If not, see http://www.gnu.org/licenses/.
## Added by Justin Wilkins
## 20/10/2005
#' Box-and-whisker plot of weighted residuals vs the independent variable for
#' Xpose 4
#'
#' This creates a box and whisker plot of weighted residuals (WRES) vs the
#' independent variable (IDV), and is a specific function in Xpose 4. It is a
#' wrapper encapsulating arguments to the \code{xpose.plot.bw} function. Most
#' of the options take their default values from xpose.data object but may be
#' overridden by supplying them as arguments.
#'
#' This creates a box and whisker plot of weighted residuals (WRES) vs the
#' independent variable (IDV), and is a specific function in Xpose 4. It is a
#' wrapper encapsulating arguments to the \code{xpose.plot.bw} function. Most
#' of the options take their default values from xpose.data object but may be
#' overridden by supplying them as arguments.
#'
#' A wide array of extra options controlling bwplots are available. See
#' \code{\link{xpose.plot.bw}} and \code{\link{xpose.panel.bw}} for details.
#'
#' @param object An xpose.data object.
#' @param \dots Other arguments passed to \code{link{xpose.plot.bw}}.
#' @return Returns a stack of box-and-whisker plots of WRES vs IDV.
#' @author E. Niclas Jonsson, Mats Karlsson, Andrew Hooker & Justin Wilkins
#' @seealso \code{\link{xpose.plot.bw}}, \code{\link{xpose.panel.bw}},
#' \code{\link[lattice]{bwplot}}, \code{\link{xpose.prefs-class}},
#' \code{\link{xpose.data-class}}
#' @keywords methods
#' @examples
#' ## Here we load the example xpose database
#' xpdb <- simpraz.xpdb
#'
#' wres.vs.idv.bw(xpdb)
#'
#' @export wres.vs.idv.bw
#' @family specific functions
"wres.vs.idv.bw" <-
function(object,
#main = NULL,
#xlb = NULL,
#ylb = NULL,
#onlyfirst=FALSE,
#inclZeroWRES=FALSE,
#subset=xsubset(object),
#mirror=FALSE,
#seed = NULL,
#bins = 10,
#samp = NULL,
...) {
## check for arguments in function
if(is.null(check.vars(c("wres","idv"),
object,silent=FALSE))) {
return()
}
xplot <- xpose.plot.bw(xvardef("wres",object),
xvardef("idv",object),
#xlb = xlb,
#ylb = ylb,
#scales=list(cex=0.5,tck=0.5),
#aspect="fill",
object,#main=list(main,cex=0.7),
#main = main,
#bins=bins,
#ids=FALSE,
binvar = xvardef("idv",object),
#xvar = xvardef("wres",object),
#subset=subset,
...)
return(xplot)
}