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setup.py
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setup.py
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#!/usr/bin/env python
from setuptools import setup, find_packages
import glob
import shutil
import os
script = 'peak/peak'
shutil.copy(f'{script}.py', script)
os.chmod(script, 0o755)
scripts = glob.glob('peak/*.pl')
scripts.append(script)
with open('README.md') as f:
long_description = f.read()
setup(
name='eclip-peak',
version='1.0.6',
description='Pipeline for using IDR to identify a set of reproducible peaks given eClIP dataset with '
'two or three replicates.',
long_description=long_description,
long_description_content_type='text/markdown',
url='https://github.com/VanNostrandLab/peak',
author='FEI YUAN',
author_email='fei.yuan@bcm.edu',
license='MIT',
license_files='LICENSE',
classifiers=[
'Programming Language :: Python :: 3',
'License :: OSI Approved :: MIT License',
'Operating System :: POSIX'
],
keywords='eCLIP-seq, peaks, bioinformatics',
packages=find_packages(),
include_package_data=True,
install_requires=[
'cmder>=1.0',
'pandas>=1.2.3',
'inflect>=5.3.0',
'seqflow>=0.0.3',
],
scripts=scripts
)