Makes reprounzip-vistrails a separate package

.travis/install.sh

@@ -19,6 +19,7 @@ in
         cd reprounzip && python setup.py install
         cd reprounzip-docker && python setup.py install
         cd reprounzip-vagrant && python setup.py install
+        cd reprounzip-vistrails && python setup.py install
 EOF
         ;;
     coverage_py)
@@ -31,6 +32,7 @@ EOF
         cd reprounzip && python setup.py develop
         cd reprounzip-docker && python setup.py develop
         cd reprounzip-vagrant && python setup.py develop
+        cd reprounzip-vistrails && python setup.py install
 EOF
         ;;
     check_style)

allsetups.sh

@@ -9,3 +9,4 @@ cd $DIR/reprozip; python setup.py "$@"
 cd $DIR/reprounzip; python setup.py "$@"
 cd $DIR/reprounzip-docker; python setup.py "$@"
 cd $DIR/reprounzip-vagrant; python setup.py "$@"
+cd $DIR/reprounzip-vistrails; python setup.py "$@"

reprounzip-vistrails/LICENSE.txt

@@ -0,0 +1,27 @@
+Copyright (c) 2014, New York University
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+1. Redistributions of source code must retain the above copyright notice, this
+   list of conditions and the following disclaimer.
+
+2. Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+
+3. Neither the name of the copyright holder nor the names of its contributors
+   may be used to endorse or promote products derived from this software
+   without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
+ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

reprounzip-vistrails/MANIFEST.in

@@ -0,0 +1,2 @@
+include README.rst
+include LICENSE.txt

reprounzip-vistrails/README.rst

@@ -0,0 +1,33 @@
+ReproZip
+========
+
+`ReproZip <http://vida-nyu.github.io/reprozip/>`__ is a tool aimed at simplifying the process of creating reproducible
+experiments from command-line executions, a frequently-used common denominator
+in computational science. It tracks operating system calls and creates a package
+that contains all the binaries, files and dependencies required to run a given
+command on the author's computational environment (packing step).
+A reviewer can then extract the experiment in his environment to reproduce the results (unpacking step).
+
+reprounzip-vistrails
+--------------------
+
+This is a plugin that creates VisTrails workflows from unpacked experiments. See the `VisTrails website <http://www.vistrails.org/>`_ for more information about VisTrails.
+
+Please refer to `reprozip <https://pypi.python.org/pypi/reprozip>`__,
+`reprounzip <https://pypi.python.org/pypi/reprounzip>`_,
+and `reprounzip-docker <https://pypi.python.org/pypi/reprounzip-docker>`_
+for other components and plugins.
+
+
+Additional Information
+----------------------
+
+For more detailed information, please refer to our `website <http://vida-nyu.github.io/reprozip/>`_, as well as to
+our `documentation <http://reprozip.readthedocs.org/>`_.
+
+ReproZip is currently being developed at `NYU <http://engineering.nyu.edu/>`_. The team includes:
+
+* `Fernando Chirigati <http://vgc.poly.edu/~fchirigati/>`_
+* `Rémi Rampin <https://www.linkedin.com/profile/view?id=98448601>`_
+* `Dennis Shasha <http://cs.nyu.edu/shasha/>`_
+* `Juliana Freire <http://vgc.poly.edu/~juliana/>`_

reprounzip-vistrails/reprounzip/__init__.py

@@ -0,0 +1,5 @@
+try:  # pragma: no cover
+    __import__('pkg_resources').declare_namespace(__name__)
+except ImportError:  # pragma: no cover
+    from pkgutil import extend_path
+    __path__ = extend_path(__path__, __name__)

reprounzip-vistrails/reprounzip/plugins/__init__.py

@@ -0,0 +1,5 @@
+try:  # pragma: no cover
+    __import__('pkg_resources').declare_namespace(__name__)
+except ImportError:  # pragma: no cover
+    from pkgutil import extend_path
+    __path__ = extend_path(__path__, __name__)

reprounzip-vistrails/setup.cfg

@@ -0,0 +1,2 @@
+[bdist_wheel]
+universal = 1

reprounzip-vistrails/setup.py

@@ -0,0 +1,40 @@
+import os
+from setuptools import setup
+import sys
+
+
+# pip workaround
+os.chdir(os.path.abspath(os.path.dirname(__file__)))
+
+
+with open('README.rst') as fp:
+    description = fp.read()
+req = [
+    'reprounzip>=0.4.1',
+    'rpaths>=0.8']
+if sys.version_info < (2, 7):
+    req.append('argparse')
+setup(name='reprounzip-vistrails',
+      version='0.4.1',
+      packages=['reprounzip', 'reprounzip.plugins'],
+      entry_points={
+          'reprounzip.plugins': [
+              'vistrails = reprounzip.plugins.vistrails:setup_vistrails']},
+      namespace_packages=['reprounzip', 'reprounzip.plugins'],
+      install_requires=req,
+      description="Allows the ReproZip unpacker to create virtual machines",
+      author="Remi Rampin, Fernando Chirigati, Dennis Shasha, Juliana Freire",
+      author_email='reprozip-users@vgc.poly.edu',
+      maintainer="Remi Rampin",
+      maintainer_email='remirampin@gmail.com',
+      url='http://vida-nyu.github.io/reprozip/',
+      long_description=description,
+      license='BSD',
+      keywords=['reprozip', 'reprounzip', 'reproducibility', 'provenance',
+                'vida', 'nyu', 'vistrails'],
+      classifiers=[
+          'Development Status :: 3 - Alpha',
+          'Intended Audience :: Science/Research',
+          'License :: OSI Approved :: BSD License',
+          'Topic :: Scientific/Engineering',
+          'Topic :: System :: Archiving'])

reprounzip/setup.py

@@ -26,9 +26,7 @@
               'graph = reprounzip.unpackers.graph:setup',
               'installpkgs = reprounzip.unpackers.default:setup_installpkgs',
               'directory = reprounzip.unpackers.default:setup_directory',
-              'chroot = reprounzip.unpackers.default:setup_chroot'],
-          'reprounzip.plugins': [
-              'vistrails = reprounzip.plugins.vistrails:setup_vistrails']},
+              'chroot = reprounzip.unpackers.default:setup_chroot']},
       namespace_packages=['reprounzip', 'reprounzip.unpackers'],
       install_requires=req,
       extras_require={