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non-zero exit status 1 #60

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B1991ing opened this issue Apr 22, 2024 · 3 comments
Open

non-zero exit status 1 #60

B1991ing opened this issue Apr 22, 2024 · 3 comments

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@B1991ing
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Dear Oskar,

If I install according to the official tutorial, I will have another error as shown in the screenshot. Do you have any idea how to solve it?

official tutorial
git clone https://github.com/a-h-b/binny.git
cd binny
./binny -i config/config.init.yaml

Screenshot1
截屏2024-04-22 09 50 12

Screenshot2
截屏2024-04-22 09 50 47

Screenshot3
截屏2024-04-22 09 51 23

Screenshot4
截屏2024-04-22 09 51 56

Screenshot5
截屏2024-04-22 09 52 19

Best,

Bing

@Andyargueasae
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Hi Bing,

Yeah I also suffered from unknown module not found error during init, the issue is in #59.
Not really sure what is going on.

Andy

@B1991ing
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Yeah I also suffered from unknown module not found error during init, the issue is in #59.
Not really sure what is going on.

Hi Andy,

I am trying to use mamba installation now.

mamba create -n binny_env
To activate this environment, use

 $ mamba activate binny_env

To deactivate an active environment, use

 $ mamba deactivate

mamba activate binny_env
mamba create --prefix binny bioconda::binny
To activate this environment, use

 $ mamba activate /work/home/songbing/binny

To deactivate an active environment, use

 $ mamba deactivate

mamba deactivate

No error happened during installation.

Best,

Bing

@Andyargueasae
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Hi Bing,

I have tried using this method. I found that all packages used for binny to run are already here. So does it mean when running binny the envs are all covered?

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