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DESCRIPTION
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DESCRIPTION
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Package: pointillism
Title: Single-cell RNA-seq toolkit
Description: Toolkit for single-cell RNA-seq clustering analysis.
Version: 0.7.0
Date: 2023-10-04
Authors@R: c(
person(
given = "Michael",
family = "Steinbaugh",
email = "mike@steinbaugh.com",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-2403-2221")
),
person(
given = "Acid Genomics",
role = c("cph", "fnd")
),
person(
given = "Rory",
family = "Kirchner",
email = "roryk@alum.mit.edu",
role = "ctb",
comment = c(ORCID = "0000-0003-4814-5885")
))
URL:
https://r.acidgenomics.com/packages/pointillism/,
https://github.com/acidgenomics/r-pointillism/
BugReports: https://github.com/acidgenomics/r-pointillism/issues/
License: AGPL-3
Encoding: UTF-8
Depends: R (>= 4.3)
Imports:
AcidBase (>= 0.7.0),
AcidCLI (>= 0.3.0),
AcidExperiment (>= 0.5.0),
AcidGenerics (>= 0.7.1),
AcidGenomes (>= 0.6.0),
AcidMarkdown (>= 0.3.0),
AcidPlots (>= 0.7.0),
AcidPlyr (>= 0.5.0),
AcidSingleCell (>= 0.4.0),
BiocGenerics (>= 0.46.0),
BiocParallel (>= 1.34.0),
IRanges (>= 2.34.0),
Matrix (>= 1.6.1),
S4Vectors (>= 0.38.0),
Seurat (>= 4.9.9),
SeuratObject (>= 4.9.9),
SingleCellExperiment (>= 1.22.0),
SummarizedExperiment (>= 1.30.0),
ggplot2 (>= 3.4.3),
goalie (>= 0.7.1),
pipette (>= 0.14.0),
syntactic (>= 0.7.0),
methods,
stats,
utils
Suggests:
AcidTest (>= 0.8.0),
basejump (>= 0.18.0),
future (>= 1.33.0),
rmarkdown (>= 2.25),
testthat (>= 3.1.10)
Additional_repositories: https://r.acidgenomics.com
Config/testthat/edition: 3
Config/testthat/parallel: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
biocViews: SingleCell