Allow passing a string value for t
to the run
method.
Added a -t argument to RecombinationAnalysis.run()
.
Added note about license on underlying 3seq
code to README.
Fixed variable name typo in README.md
example Python.
Use the 3seq
option -ptable
when running with -full
to set the
p-value table that should be used. So passing a p-value table file to
RecombinationAnalysis
(now mandatory) now works correctly. Note though
that this will result in the file name being recorded in your 3seq
config
file, replacing whatever value you may have had there previously while
doing other interactive work with 3seq
.
TravisCI tweaks. Changed default location of p-value lookup table
file. This is only used in running tests at the moment. Changes will be
needed once 3seq
can be given a p-value table file on the command line.
Added TravisCI support.
Initial release.