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Fix an issue with the fitting when there are outliers.
Since the outliers use to not have filtered parameters and covariance, when going through the different states for the smoothing their covariance matrix was taken to be equal to 0 resulting in a bad smoothing. Instead we now put the filtered covariance for the outliers equal to the predicted one (like the material surface).
The material flag was also always on for the measurement state now we check that material is present to turn that flag on.