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Ubuntu version not working #22

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andreped opened this issue Jun 6, 2022 · 5 comments
Closed

Ubuntu version not working #22

andreped opened this issue Jun 6, 2022 · 5 comments
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@andreped
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andreped commented Jun 6, 2022

Tried downloading the latest artifact on Ubuntu 18.04. Not working.

Did sudo dpkg -i fastpathology_ubuntu18.04_1.0.0.deb and run it. Nothing happened. Checked /opt/fastpathology/, it is there. Tried running the program from the bin/ directory, and this prompted:

INFO [139839184267968] Found variable filename in pipeline file
ERROR [139839184267968] Terminated with unhandled exception: The pipeline file requires you to give a value for the variable named filename
This is done by adding --filename <value> to the command line arguments
Aborted (core dumped)

Old release works just fine.

@andreped andreped added the bug Something isn't working label Jun 6, 2022
@andreped andreped added this to To do in Version 1.0.0 (stable release) via automation Jun 6, 2022
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andreped commented Jun 6, 2022

Hmm, now I got the same issue on Windows. But this happened after uninstalling and reinstalling.

Might be that something is not properly deleted. The program crashes immediantly at launch.

@andreped
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andreped commented Jun 6, 2022

Also, data/ directory is not removed after uninstalling - observed for windows.

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andreped commented Jun 6, 2022

After manually deleting files in C:\Users\andrp\fastpathology, the program launched and I was asked to download the models. So I believe the uninstall method has a bug - not everything is properly deleted.

I will open a new issue to address this problem, as it is probably an issue across all operating systems.

@smistad smistad moved this from To do to In progress in Version 1.0.0 (stable release) Jun 7, 2022
smistad added a commit that referenced this issue Jun 7, 2022
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smistad commented Jun 7, 2022

This was due to your old pipelines not being supported by the new software. I added a try-catch to capture this kinds of errors, to just ignore pipelines that are incorrect.

@smistad smistad closed this as completed Jun 7, 2022
Version 1.0.0 (stable release) automation moved this from In progress to Done Jun 7, 2022
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andreped commented Jun 7, 2022

I guess you have updated the data directory now, such that the updated models are downloaded? I can test later.

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