/
regulargrid.go
275 lines (232 loc) · 8.37 KB
/
regulargrid.go
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package grid
import (
"context"
"errors"
"fmt"
"image"
"math"
"runtime"
"strconv"
"github.com/airbusgeo/geocube/internal/utils/affine"
"github.com/airbusgeo/geocube/internal/utils/proj"
"github.com/airbusgeo/godal"
"github.com/twpayne/go-geom"
"github.com/twpayne/go-geom/encoding/wkb"
)
const minCellSize = 1 // Arbitrarly defined for now, but strictly positive
const maxCellSize = 65536 // Arbitrarly defined for now
// RegularGrid in a given CRS with an origin and a spatial resolution
// parameters:
// - "crs" in gdal understandable format
// - "cell_size" or ("cell_x_size", "cell_y_size"): size of the cell
// - "resolution" in crs unit
// - "ox", "oy" origin in crs unit
// - "memory_limit" to prevent crash when covering a large aoi
type RegularGrid struct {
crs *godal.SpatialRef
srid int
pixToCRS *affine.Affine
cellSizeX, cellSizeY int
lonLatToCRS *godal.Transform
crsToLonLat *godal.Transform
memoryLimit int
}
func (rg *RegularGrid) initLonLatToCRS() error {
return initProjection(&rg.lonLatToCRS, rg.crs, false)
}
func (rg *RegularGrid) initCRSToLonLat() error {
return initProjection(&rg.crsToLonLat, rg.crs, true)
}
func initProjection(p **godal.Transform, crs *godal.SpatialRef, inverse bool) error {
if *p == nil {
var err error
if *p, err = proj.CreateLonLatProj(crs, inverse); err != nil {
return err
}
}
return nil
}
func invalidRegularGridError(desc string, args ...interface{}) error {
return fmt.Errorf("invalid RegularGrid:"+desc, args...)
}
func newRegularGrid(flags []string, parameters map[string]string) (Grid, error) {
grid := RegularGrid{memoryLimit: 9223372036854775807}
// grid.CRS : Create and initialize the spatial reference from flags & parameters
var err error
grid.crs, grid.srid, err = proj.CRSFromUserInput(parameters["crs"])
if err != nil {
return nil, invalidRegularGridError("CRS parameters [\"crs\"=%v]: %w", parameters["crs"], err)
}
if grid.srid == 0 {
return nil, invalidRegularGridError("CRS parameters: unable to retrieve SRID from input")
}
runtime.SetFinalizer(grid.crs, func(crs *godal.SpatialRef) { crs.Close() })
// grid.CellSize
{
if cellSize, ok := parameters["cell_size"]; ok {
grid.cellSizeX, _ = strconv.Atoi(cellSize)
grid.cellSizeY = grid.cellSizeX
} else {
cellSizeX, okX := parameters["cell_x_size"]
cellSizeY, okY := parameters["cell_y_size"]
if okX && okY {
grid.cellSizeX, _ = strconv.Atoi(cellSizeX)
grid.cellSizeY, _ = strconv.Atoi(cellSizeY)
}
}
if grid.cellSizeX < minCellSize || grid.cellSizeX > maxCellSize || grid.cellSizeY < minCellSize || grid.cellSizeY > maxCellSize {
return nil, invalidRegularGridError("CellSize parameters: must contain a valid 'cell_size', 'cell_x_size' or 'cell_y_size' in [%d, %d]", minCellSize, maxCellSize)
}
}
// grid.Transform
{
// Resolution
resolutions := parameters["resolution"]
resolution, _ := strconv.ParseFloat(resolutions, 64)
if resolution <= 0 {
return nil, invalidRegularGridError("Resolution parameters: must contain a valid 'resolution'")
}
//OriginX & OriginY
var originX, originY float64
var err error
if ox, ok := parameters["ox"]; ok {
originX, err = strconv.ParseFloat(ox, 64)
if err != nil {
return nil, invalidRegularGridError("Ox invalid parameter: " + ox)
}
}
if oy, ok := parameters["oy"]; ok {
originY, err = strconv.ParseFloat(oy, 64)
if err != nil {
return nil, invalidRegularGridError("Oy invalid parameter: " + oy)
}
}
// Scale and translate
grid.pixToCRS = affine.Translation(originX, originY).Multiply(affine.Scale(resolution, -resolution))
}
// Memory limit
if mem, ok := parameters["memory_limit"]; ok {
if grid.memoryLimit, err = strconv.Atoi(mem); err != nil {
return nil, invalidRegularGridError("Memory limit[%s]: %w", mem, err)
}
}
return &grid, nil
}
// Cell implements Grid and returns a Cell in the regular grid with the provided URI (format : i/j))
func (rg *RegularGrid) Cell(uri string) (*Cell, error) {
var i, j int
if n, err := fmt.Sscanf(uri, "%d/%d", &i, &j); err != nil || n != 2 {
return nil, invalidRegularGridError("Cell format must be 'i/j' as integers")
}
cellToCRS := rg.pixToCRS.Multiply(affine.Translation(float64(i*rg.cellSizeX), float64(j*rg.cellSizeY)))
if err := rg.initCRSToLonLat(); err != nil {
return nil, invalidRegularGridError("unable to initialize projection: %w", err)
}
return newCell(uri, rg.crs, rg.srid, cellToCRS, rg.cellSizeX, rg.cellSizeY, rg.crsToLonLat), nil
}
// Create a Dataset containing a geometry
// The caller is responsible to close the output dataset
func createGeometryFromWKB(g *geom.MultiPolygon, crs *godal.SpatialRef) (*godal.Geometry, error) {
// Convert the input geometry to WKB and update feature.geometry
geomwkb, err := wkb.Marshal(g, wkb.NDR)
if err != nil {
return nil, err
}
geometry, err := godal.NewGeometryFromWKB(geomwkb, crs)
if err != nil {
return nil, err
}
geometry.SetSpatialRef(crs)
return geometry, nil
}
// Covers implements Grid
func (rg *RegularGrid) Covers(ctx context.Context, geomAOI *geom.MultiPolygon) (<-chan StreamedURI, error) {
if geomAOI.Stride() == 0 || geomAOI.NumCoords() == 0 {
return nil, fmt.Errorf("Covers: empty AOI")
}
// Transform coordinates from (lon, lat) to CRS coordinates
if err := rg.initLonLatToCRS(); err != nil {
return nil, fmt.Errorf("Covers: Unable to initialize projection: %w", err)
}
x, y := proj.FlatCoordToXY(geomAOI.FlatCoords())
if err := rg.lonLatToCRS.TransformEx(x, y, make([]float64, len(x)), nil); err != nil {
return nil, err
}
crsAOI := geom.NewMultiPolygonFlat(geom.XY, proj.XYToFlatCoord(x, y), geomAOI.Endss())
// Create the dataset which contains the coordinates in the given crs
geometryIn, err := createGeometryFromWKB(crsAOI, rg.crs)
if err != nil {
return nil, fmt.Errorf("Covers: Unable to create a geometry %w", err)
}
// Get the bounds of the AOI
b := crsAOI.Bounds()
if b.IsEmpty() {
return nil, errors.New("Covers: Error in input geometry: the bounds are empty")
}
// Create the transformation which maps crs coordinates (x, y) to cell coordinates (i, j)
cellToCRS := rg.pixToCRS.Multiply(affine.Scale(float64(rg.cellSizeX), float64(rg.cellSizeY)))
crsToCell := cellToCRS.Inverse()
// Get the bounds in cell coordinates
i0f, j0f := crsToCell.Transform(b.Min(0), b.Max(1))
i1f, j1f := crsToCell.Transform(b.Max(0), b.Min(1))
i0f, j0f = math.Floor(i0f-1), math.Floor(j0f-1)
i1f, j1f = math.Ceil(i1f+1), math.Ceil(j1f+1)
// Retrieve the equivalent coordinates in the given crs
ulX, ulY := cellToCRS.Transform(i0f, j0f)
lrX, lrY := cellToCRS.Transform(i1f, j1f)
width := int(math.Abs(ulX-lrX) / math.Abs(cellToCRS.Rx()))
height := int(math.Abs(ulY-lrY) / math.Abs(cellToCRS.Ry()))
if width*height*2 > rg.memoryLimit {
return nil, fmt.Errorf("Covers: Not enough memory (needed:%d, provided:%d)", width*height*2, rg.memoryLimit)
}
ds, err := godal.Create(godal.Memory, "", 1, godal.Byte, width, height)
if err != nil {
return nil, err
}
defer ds.Close()
if err := ds.SetSpatialRef(rg.crs); err != nil {
return nil, err
}
if err := ds.SetGeoTransform([6]float64{ulX, cellToCRS.Rx(), 0, ulY, 0, cellToCRS.Ry()}); err != nil {
return nil, err
}
if err := ds.RasterizeGeometry(geometryIn, godal.Bands(0), godal.Values(255), godal.AllTouched()); err != nil {
return nil, fmt.Errorf("Covers: Fail to rasterize: %w", err)
}
// Get the image where each pixel is a cell and each non-zero pixel is covered by the aoi.
img, err := rg.getGrayImage(ds)
if err != nil {
return nil, fmt.Errorf("getGrayImage: %w", err)
}
// Get the coordinates of non zero pixels
uris := make(chan StreamedURI)
go func() {
defer close(uris)
s := img.Rect.Size()
i0, j0 := int(i0f), int(j0f)
for j := 0; j < s.Y; j++ {
for i := 0; i < s.X; i++ {
if img.Pix[j*img.Stride+i] != 0 {
uris <- StreamedURI{URI: fmt.Sprintf("%d/%d", i+i0, j+j0)}
}
}
select {
case <-ctx.Done():
uris <- StreamedURI{Error: fmt.Errorf("RegularGrid.Covers: %w", ctx.Err())}
return
default:
}
}
}()
return uris, nil
}
func (rg *RegularGrid) getGrayImage(d *godal.Dataset) (*image.Gray, error) {
xSize := d.Structure().SizeX
ySize := d.Structure().SizeY
band := d.Bands()[0]
img := image.NewGray(image.Rect(0, 0, xSize, ySize))
if err := band.Read(0, 0, img.Pix, xSize, ySize); err != nil {
return nil, err
}
return img, nil
}