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Fragment database used #5

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DrrDom opened this issue Jul 22, 2022 · 2 comments
Closed

Fragment database used #5

DrrDom opened this issue Jul 22, 2022 · 2 comments
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documentation Improvements or additions to documentation enhancement New feature or request

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@DrrDom
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DrrDom commented Jul 22, 2022

Hi Alejandro,

I'm a developed of CReM and I noticed that you use a fragment database with suffix sc2 in examples in documentation. I would not recommend to use it, use the one with suffix sa2. SC scores are not very reasonable to estimate synthetic accessibility and those databases were left for historical reasons. Using sa2 database will result in more meaningful molecules. Just a recommendation from my experience.
You may also ask questions by email, if you will have them - pavel_polishchuk@ukr.net.

Pavel.

@ale94mleon ale94mleon added documentation Improvements or additions to documentation enhancement New feature or request labels Jul 22, 2022
@ale94mleon
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ale94mleon commented Jul 22, 2022

Hi Pavel,
Thank you so much for your comment. Again, congrats for the CReM implementation! I just used the smaller data base for the tutorial and the tests in order to do not spend too much time during download. But I will add your comment on the documentation of MolDrug. Thanks again!

@ale94mleon
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I already added some comment in the docs. See here

Repository owner locked and limited conversation to collaborators Aug 3, 2022
@ale94mleon ale94mleon converted this issue into discussion #6 Aug 3, 2022

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