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How to debug “the process cannot access it” when running imt_gsea ? #18
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How do you solve the problem? I met the same error.
It showed something wrong. 2024-01-24 19:34:23,707: Running the pls analysis.
2024-01-24 19:34:57,818: Performing bootstrapping of the genes. During handling of the above exception, another exception occurred: Traceback (most recent call last): During handling of the above exception, another exception occurred: Traceback (most recent call last): (I am using imaging-transcriptomics V1.1.7, and python 3.8.) |
Hi, apologies for this, but the issue is due to using the toolbox in Windows. |
Dear alegiac95,
Thanks for providing this great scripts! I am using this toolbox in my project but meeting a bug.
After PLS analysis, I obtained .pkl file.
When I did imt_gsea (below),
imt_gsea –i C:\Users\jwli2\Desktop\update\Imt_PET_pls\pls_analysis.pkl --geneset lake
It showed something wrong.
(I am using imaging-transcriptomics V1.1.7)
I tried to solve it but had no idea.
I would appreciate your help, thanks!
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