GitHub - Aleksobrad/Humanized-Mouse-Data: Includes lists of shared clones and unshared clones, cross-reactives and allo-non-cross-reactives, t1d clones, and raw single-cell sequencing files. Also includes full TCR-Sequencing .tsv output from Adaptive ImmunoSeq.

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Includes lists of shared clones and unshared clones, cross-reactives and allo-non-cross-reactives, t1d clones, and raw single-cell sequencing files. Also includes full TCR-Sequencing .tsv output from Adaptive ImmunoSeq.

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
1AutoA_CD4.csv		1AutoA_CD4.csv
1AutoA_CD8.csv		1AutoA_CD8.csv
1AutoA_Treg.csv		1AutoA_Treg.csv
1AutoB_CD4.csv		1AutoB_CD4.csv
1AutoB_CD8.csv		1AutoB_CD8.csv
1AutoB_Treg.csv		1AutoB_Treg.csv
1AutoC_CD4.csv		1AutoC_CD4.csv
1AutoC_CD8.csv		1AutoC_CD8.csv
1AutoC_Treg.csv		1AutoC_Treg.csv
2AlloA_CD4.csv		2AlloA_CD4.csv
2AlloA_CD8.csv		2AlloA_CD8.csv
2AlloA_DP69negative.csv		2AlloA_DP69negative.csv
2AlloA_DP69positive.csv		2AlloA_DP69positive.csv
2AlloA_Treg.csv		2AlloA_Treg.csv
2AlloB_CD4.csv		2AlloB_CD4.csv
2AlloB_CD8.csv		2AlloB_CD8.csv
2AlloB_DP69negative.csv		2AlloB_DP69negative.csv
2AlloB_DP69positive.csv		2AlloB_DP69positive.csv
2AlloB_Treg.csv		2AlloB_Treg.csv
2AlloC_CD4.csv		2AlloC_CD4.csv
2AlloC_CD8.csv		2AlloC_CD8.csv
2AlloC_DP69negative.csv		2AlloC_DP69negative.csv
2AlloC_DP69positive.csv		2AlloC_DP69positive.csv
2AlloC_Treg.csv		2AlloC_Treg.csv
2AutoA_CD4.csv		2AutoA_CD4.csv
2AutoA_CD8.csv		2AutoA_CD8.csv
2AutoA_DP69negative.csv		2AutoA_DP69negative.csv
2AutoA_DP69positive.csv		2AutoA_DP69positive.csv
2AutoA_Treg.csv		2AutoA_Treg.csv
2AutoB_CD4.csv		2AutoB_CD4.csv
2AutoB_CD8.csv		2AutoB_CD8.csv
2AutoB_DP69negative.csv		2AutoB_DP69negative.csv
2AutoB_DP69positive.csv		2AutoB_DP69positive.csv
2AutoB_Treg.csv		2AutoB_Treg.csv
2AutoC_CD4.csv		2AutoC_CD4.csv
2AutoC_CD8.csv		2AutoC_CD8.csv
2AutoC_DP69negative.csv		2AutoC_DP69negative.csv
2AutoC_DP69positive.csv		2AutoC_DP69positive.csv
2AutoC_Treg.csv		2AutoC_Treg.csv
3AlloA_CD4_Peripheral.csv		3AlloA_CD4_Peripheral.csv
3AlloA_CD4_Thymic.csv		3AlloA_CD4_Thymic.csv
3AlloA_CD8_Peripheral.csv		3AlloA_CD8_Peripheral.csv
3AlloA_CD8_Thymic.csv		3AlloA_CD8_Thymic.csv
3AlloB_CD4_Peripheral.csv		3AlloB_CD4_Peripheral.csv
3AlloB_CD4_Thymic.csv		3AlloB_CD4_Thymic.csv
3AlloB_CD8_Peripheral.csv		3AlloB_CD8_Peripheral.csv
3AlloB_CD8_Thymic.csv		3AlloB_CD8_Thymic.csv
cross-reactives.zip		cross-reactives.zip
crossreactive_templatecounts.csv		crossreactive_templatecounts.csv
shared_vs_unshared.zip		shared_vs_unshared.zip
single-cell-seq data.zip		single-cell-seq data.zip
t1d_sequences.csv		t1d_sequences.csv
vloupe 1368 (2AutoC) SP-CD4.vloupe		vloupe 1368 (2AutoC) SP-CD4.vloupe
vloupe 1370 (2AutoB) SP-CD4.vloupe		vloupe 1370 (2AutoB) SP-CD4.vloupe
vloupe 1373 (2AlloC) SP-CD4.vloupe		vloupe 1373 (2AlloC) SP-CD4.vloupe
vloupe 1374 (2AlloA) SP-CD4.vloupe		vloupe 1374 (2AlloA) SP-CD4.vloupe
vloupe 1375 (2AlloB) SP-CD4.vloupe		vloupe 1375 (2AlloB) SP-CD4.vloupe