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Oligo-Banding

This is the repository for all software and scripts described in (publication in progress). This publication describes a new technique to simplify and automatize karyotyping based on oligo-banding, a semi-random color barcode for chromosomes.

Tools

  • oligo banding → This tool is the image analyzer built as an ImageJ macro
  • random banding → This tool is used to generate a semi-random color barcode when creating the oligo probes library
  • automatic ROIs → This tool (in developpement) is used to create regions of interest (ROIs) on the chromosomes