Getting zsh: illegal hardware instruction on MacBook M1

[schittarath3]

I am attempting to run the EntityLinking example, but importing the module
from scispacy.linking import EntityLinker
results in
zsh: illegal hardware instruction /Users/username/opt/anaconda3/envs/HCNLP/bin/python.
I am able to run the first example to get the text entities fine.

OS: MacOS 11.4 on M1 MBP
Python: 3.7.10
conda: 4.10.1
scispacy: 0.4.0
spacy: 3.0.6

[dakinggg]

This is probably related to the nmslib package. Can you check if you are able to install and use that package? Looks like the same issue as #365

[schittarath3]

This is probably related to the nmslib package. Can you check if you are able to install and use that package? Looks like the same issue as #365

Thanks! For future reference, I uninstall nmslib then built from source using pip install --no-binary :all: nmslib

[jpetot]

this solved for me on MacOs M1 Monterey : CFLAGS="-mavx -DWARN(a)=(a)" pip install nmslib

nmslib/nmslib#476 (comment)

[aditya-kanekar]

Thanks @jpetot this worked for me.