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presentation-r-example.Rmd
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presentation-r-example.Rmd
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---
title: Thorough research of this special topic regarding the influence of various factors
subtitle: Yeah we did it!
author: [Author 1, Author 2]
date: Date of presentation
institute: Institute, Dept., University
biblio-files: parsed-references.bib
toc: true
sectiontoc: true
sectiontitle: true
captionfont: size=\scriptsize
# customization of the templates
header-includes: \input{presentation-example.header}
knit: (function(input, encoding, make = TRUE) { source('templates/makefile-renderer.R', local = TRUE) })
---
%% smart
%% to=beamer
%% slide-level 3
%% template=templates/presentation.tex
%% filter=templates/presentation-filters.py
%% biblatex
```{r packages-and-options, cache=FALSE}
library('ggplot2')
library('knitr')
linesize <- 0.25
pointsize <- 1
theme_set(theme_bw(base_size = 6) + theme(
line = element_line(size = linesize, colour = 'black', linetype = 1, lineend = 'butt')))
for (geom in c('point', 'line', 'hline', 'vline', 'abline', 'boxplot', 'pointrange', 'errorbar', 'errorbarh')) {
update_geom_defaults(geom, list(size = ifelse(geom == 'point', pointsize, linesize)))
}
knitr::opts_chunk$set(fig.width = 4.7, fig.height = 1.9)
```
# Introduction
### Introduction Slide 1
<!-- Comments -->
Default lists:
- Citations [@Macherey2006] and @Macherey2006
- references have a clickable link to Pubmed or Amazon
- Standard abreviations \\eg and \\ie for \eg and \ie
- Units like \pps{900}
- **Highlights** and *highlights*
# Methods
# Results
## Part 1
[smallfooter]
### Results Slide 1
- You can replace the footer by a minimal version
[largefooter]
# Figure Examples
### Full Screen
- You can show full-screen figures as on the next slide
[largefooter]
### Fill Vertical
### Without Caption
[columns=2]
[column]
[column]
[/columns]
### Animated
[columns=2]
[column]
[column]
[/columns]
### Animated 2
[columns=2]
[column]
[column]
```{r iris, fig.cap='<1|handout:0><2>iris data', fig.width=2.2, fig.height=2.2}
ggplot(iris, aes(Sepal.Length, Petal.Length)) +
geom_point()
ggplot(iris, aes(Sepal.Length, Petal.Length)) +
geom_point(aes(color = Species)) +
guides(color = FALSE)
```
[/columns]
### With Caption
[columns=2]
[column]
[column]
[/columns]
# Conclusions
[notoc]
[nosupertitle]
### Conclusions
Numbered lists:
1. First paragraph \pause
2. Second paragraph
3. Third paragraph
Continued paragraphs
<!-- vi: set spell spelllang=en linebreak et nolist showbreak=>\ \ \ : -->