forked from apache/spark
-
Notifications
You must be signed in to change notification settings - Fork 1
/
DAGScheduler.scala
1688 lines (1536 loc) · 69.3 KB
/
DAGScheduler.scala
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.spark.scheduler
import java.io.NotSerializableException
import java.util.Properties
import java.util.concurrent.TimeUnit
import java.util.concurrent.atomic.AtomicInteger
import scala.collection.Map
import scala.collection.mutable.{HashMap, HashSet, Stack}
import scala.concurrent.Await
import scala.concurrent.duration._
import scala.language.existentials
import scala.language.postfixOps
import scala.util.control.NonFatal
import org.apache.commons.lang3.SerializationUtils
import org.apache.spark._
import org.apache.spark.broadcast.Broadcast
import org.apache.spark.executor.TaskMetrics
import org.apache.spark.network.util.JavaUtils
import org.apache.spark.partial.{ApproximateActionListener, ApproximateEvaluator, PartialResult}
import org.apache.spark.rdd.RDD
import org.apache.spark.rpc.RpcTimeout
import org.apache.spark.storage._
import org.apache.spark.storage.BlockManagerMessages.BlockManagerHeartbeat
import org.apache.spark.util._
/**
* The high-level scheduling layer that implements stage-oriented scheduling. It computes a DAG of
* stages for each job, keeps track of which RDDs and stage outputs are materialized, and finds a
* minimal schedule to run the job. It then submits stages as TaskSets to an underlying
* TaskScheduler implementation that runs them on the cluster. A TaskSet contains fully independent
* tasks that can run right away based on the data that's already on the cluster (e.g. map output
* files from previous stages), though it may fail if this data becomes unavailable.
*
* Spark stages are created by breaking the RDD graph at shuffle boundaries. RDD operations with
* "narrow" dependencies, like map() and filter(), are pipelined together into one set of tasks
* in each stage, but operations with shuffle dependencies require multiple stages (one to write a
* set of map output files, and another to read those files after a barrier). In the end, every
* stage will have only shuffle dependencies on other stages, and may compute multiple operations
* inside it. The actual pipelining of these operations happens in the RDD.compute() functions of
* various RDDs (MappedRDD, FilteredRDD, etc).
*
* In addition to coming up with a DAG of stages, the DAGScheduler also determines the preferred
* locations to run each task on, based on the current cache status, and passes these to the
* low-level TaskScheduler. Furthermore, it handles failures due to shuffle output files being
* lost, in which case old stages may need to be resubmitted. Failures *within* a stage that are
* not caused by shuffle file loss are handled by the TaskScheduler, which will retry each task
* a small number of times before cancelling the whole stage.
*
* When looking through this code, there are several key concepts:
*
* - Jobs (represented by [[ActiveJob]]) are the top-level work items submitted to the scheduler.
* For example, when the user calls an action, like count(), a job will be submitted through
* submitJob. Each Job may require the execution of multiple stages to build intermediate data.
*
* - Stages ([[Stage]]) are sets of tasks that compute intermediate results in jobs, where each
* task computes the same function on partitions of the same RDD. Stages are separated at shuffle
* boundaries, which introduce a barrier (where we must wait for the previous stage to finish to
* fetch outputs). There are two types of stages: [[ResultStage]], for the final stage that
* executes an action, and [[ShuffleMapStage]], which writes map output files for a shuffle.
* Stages are often shared across multiple jobs, if these jobs reuse the same RDDs.
*
* - Tasks are individual units of work, each sent to one machine.
*
* - Cache tracking: the DAGScheduler figures out which RDDs are cached to avoid recomputing them
* and likewise remembers which shuffle map stages have already produced output files to avoid
* redoing the map side of a shuffle.
*
* - Preferred locations: the DAGScheduler also computes where to run each task in a stage based
* on the preferred locations of its underlying RDDs, or the location of cached or shuffle data.
*
* - Cleanup: all data structures are cleared when the running jobs that depend on them finish,
* to prevent memory leaks in a long-running application.
*
* To recover from failures, the same stage might need to run multiple times, which are called
* "attempts". If the TaskScheduler reports that a task failed because a map output file from a
* previous stage was lost, the DAGScheduler resubmits that lost stage. This is detected through a
* CompletionEvent with FetchFailed, or an ExecutorLost event. The DAGScheduler will wait a small
* amount of time to see whether other nodes or tasks fail, then resubmit TaskSets for any lost
* stage(s) that compute the missing tasks. As part of this process, we might also have to create
* Stage objects for old (finished) stages where we previously cleaned up the Stage object. Since
* tasks from the old attempt of a stage could still be running, care must be taken to map any
* events received in the correct Stage object.
*
* Here's a checklist to use when making or reviewing changes to this class:
*
* - All data structures should be cleared when the jobs involving them end to avoid indefinite
* accumulation of state in long-running programs.
*
* - When adding a new data structure, update `DAGSchedulerSuite.assertDataStructuresEmpty` to
* include the new structure. This will help to catch memory leaks.
*/
private[spark]
class DAGScheduler(
private[scheduler] val sc: SparkContext,
private[scheduler] val taskScheduler: TaskScheduler,
listenerBus: LiveListenerBus,
mapOutputTracker: MapOutputTrackerMaster,
blockManagerMaster: BlockManagerMaster,
env: SparkEnv,
clock: Clock = new SystemClock())
extends Logging {
def this(sc: SparkContext, taskScheduler: TaskScheduler) = {
this(
sc,
taskScheduler,
sc.listenerBus,
sc.env.mapOutputTracker.asInstanceOf[MapOutputTrackerMaster],
sc.env.blockManager.master,
sc.env)
}
def this(sc: SparkContext) = this(sc, sc.taskScheduler)
private[spark] val metricsSource: DAGSchedulerSource = new DAGSchedulerSource(this)
private[scheduler] val nextJobId = new AtomicInteger(0)
private[scheduler] def numTotalJobs: Int = nextJobId.get()
private val nextStageId = new AtomicInteger(0)
private[scheduler] val jobIdToStageIds = new HashMap[Int, HashSet[Int]]
private[scheduler] val stageIdToStage = new HashMap[Int, Stage]
private[scheduler] val shuffleToMapStage = new HashMap[Int, ShuffleMapStage]
private[scheduler] val jobIdToActiveJob = new HashMap[Int, ActiveJob]
// Stages we need to run whose parents aren't done
private[scheduler] val waitingStages = new HashSet[Stage]
// Stages we are running right now
private[scheduler] val runningStages = new HashSet[Stage]
// Stages that must be resubmitted due to fetch failures
private[scheduler] val failedStages = new HashSet[Stage]
private[scheduler] val activeJobs = new HashSet[ActiveJob]
/**
* Contains the locations that each RDD's partitions are cached on. This map's keys are RDD ids
* and its values are arrays indexed by partition numbers. Each array value is the set of
* locations where that RDD partition is cached.
*
* All accesses to this map should be guarded by synchronizing on it (see SPARK-4454).
*/
private val cacheLocs = new HashMap[Int, IndexedSeq[Seq[TaskLocation]]]
// For tracking failed nodes, we use the MapOutputTracker's epoch number, which is sent with
// every task. When we detect a node failing, we note the current epoch number and failed
// executor, increment it for new tasks, and use this to ignore stray ShuffleMapTask results.
//
// TODO: Garbage collect information about failure epochs when we know there are no more
// stray messages to detect.
private val failedEpoch = new HashMap[String, Long]
private [scheduler] val outputCommitCoordinator = env.outputCommitCoordinator
// A closure serializer that we reuse.
// This is only safe because DAGScheduler runs in a single thread.
private val closureSerializer = SparkEnv.get.closureSerializer.newInstance()
/** If enabled, FetchFailed will not cause stage retry, in order to surface the problem. */
private val disallowStageRetryForTest = sc.getConf.getBoolean("spark.test.noStageRetry", false)
private val messageScheduler =
ThreadUtils.newDaemonSingleThreadScheduledExecutor("dag-scheduler-message")
private[scheduler] val eventProcessLoop = new DAGSchedulerEventProcessLoop(this)
taskScheduler.setDAGScheduler(this)
/**
* Called by the TaskSetManager to report task's starting.
*/
def taskStarted(task: Task[_], taskInfo: TaskInfo) {
eventProcessLoop.post(BeginEvent(task, taskInfo))
}
/**
* Called by the TaskSetManager to report that a task has completed
* and results are being fetched remotely.
*/
def taskGettingResult(taskInfo: TaskInfo) {
eventProcessLoop.post(GettingResultEvent(taskInfo))
}
/**
* Called by the TaskSetManager to report task completions or failures.
*/
def taskEnded(
task: Task[_],
reason: TaskEndReason,
result: Any,
accumUpdates: Seq[AccumulableInfo],
taskInfo: TaskInfo): Unit = {
eventProcessLoop.post(
CompletionEvent(task, reason, result, accumUpdates, taskInfo))
}
/**
* Update metrics for in-progress tasks and let the master know that the BlockManager is still
* alive. Return true if the driver knows about the given block manager. Otherwise, return false,
* indicating that the block manager should re-register.
*/
def executorHeartbeatReceived(
execId: String,
// (taskId, stageId, stageAttemptId, accumUpdates)
accumUpdates: Array[(Long, Int, Int, Seq[AccumulableInfo])],
blockManagerId: BlockManagerId): Boolean = {
listenerBus.post(SparkListenerExecutorMetricsUpdate(execId, accumUpdates))
blockManagerMaster.driverEndpoint.askWithRetry[Boolean](
BlockManagerHeartbeat(blockManagerId), new RpcTimeout(600 seconds, "BlockManagerHeartbeat"))
}
/**
* Called by TaskScheduler implementation when an executor fails.
*/
def executorLost(execId: String): Unit = {
eventProcessLoop.post(ExecutorLost(execId))
}
/**
* Called by TaskScheduler implementation when a host is added.
*/
def executorAdded(execId: String, host: String): Unit = {
eventProcessLoop.post(ExecutorAdded(execId, host))
}
/**
* Called by the TaskSetManager to cancel an entire TaskSet due to either repeated failures or
* cancellation of the job itself.
*/
def taskSetFailed(taskSet: TaskSet, reason: String, exception: Option[Throwable]): Unit = {
eventProcessLoop.post(TaskSetFailed(taskSet, reason, exception))
}
private[scheduler]
def getCacheLocs(rdd: RDD[_]): IndexedSeq[Seq[TaskLocation]] = cacheLocs.synchronized {
// Note: this doesn't use `getOrElse()` because this method is called O(num tasks) times
if (!cacheLocs.contains(rdd.id)) {
// Note: if the storage level is NONE, we don't need to get locations from block manager.
val locs: IndexedSeq[Seq[TaskLocation]] = if (rdd.getStorageLevel == StorageLevel.NONE) {
IndexedSeq.fill(rdd.partitions.length)(Nil)
} else {
val blockIds =
rdd.partitions.indices.map(index => RDDBlockId(rdd.id, index)).toArray[BlockId]
blockManagerMaster.getLocations(blockIds).map { bms =>
bms.map(bm => TaskLocation(bm.host, bm.executorId))
}
}
cacheLocs(rdd.id) = locs
}
cacheLocs(rdd.id)
}
private def clearCacheLocs(): Unit = cacheLocs.synchronized {
cacheLocs.clear()
}
/**
* Get or create a shuffle map stage for the given shuffle dependency's map side.
*/
private def getShuffleMapStage(
shuffleDep: ShuffleDependency[_, _, _],
firstJobId: Int): ShuffleMapStage = {
shuffleToMapStage.get(shuffleDep.shuffleId) match {
case Some(stage) => stage
case None =>
// We are going to register ancestor shuffle dependencies
getAncestorShuffleDependencies(shuffleDep.rdd).foreach { dep =>
shuffleToMapStage(dep.shuffleId) = newOrUsedShuffleStage(dep, firstJobId)
}
// Then register current shuffleDep
val stage = newOrUsedShuffleStage(shuffleDep, firstJobId)
shuffleToMapStage(shuffleDep.shuffleId) = stage
stage
}
}
/**
* Helper function to eliminate some code re-use when creating new stages.
*/
private def getParentStagesAndId(rdd: RDD[_], firstJobId: Int): (List[Stage], Int) = {
val parentStages = getParentStages(rdd, firstJobId)
val id = nextStageId.getAndIncrement()
(parentStages, id)
}
/**
* Create a ShuffleMapStage as part of the (re)-creation of a shuffle map stage in
* newOrUsedShuffleStage. The stage will be associated with the provided firstJobId.
* Production of shuffle map stages should always use newOrUsedShuffleStage, not
* newShuffleMapStage directly.
*/
private def newShuffleMapStage(
rdd: RDD[_],
numTasks: Int,
shuffleDep: ShuffleDependency[_, _, _],
firstJobId: Int,
callSite: CallSite): ShuffleMapStage = {
val (parentStages: List[Stage], id: Int) = getParentStagesAndId(rdd, firstJobId)
val stage: ShuffleMapStage = new ShuffleMapStage(id, rdd, numTasks, parentStages,
firstJobId, callSite, shuffleDep)
stageIdToStage(id) = stage
updateJobIdStageIdMaps(firstJobId, stage)
stage
}
/**
* Create a ResultStage associated with the provided jobId.
*/
private def newResultStage(
rdd: RDD[_],
func: (TaskContext, Iterator[_]) => _,
partitions: Array[Int],
jobId: Int,
callSite: CallSite): ResultStage = {
val (parentStages: List[Stage], id: Int) = getParentStagesAndId(rdd, jobId)
val stage = new ResultStage(id, rdd, func, partitions, parentStages, jobId, callSite)
stageIdToStage(id) = stage
updateJobIdStageIdMaps(jobId, stage)
stage
}
/**
* Create a shuffle map Stage for the given RDD. The stage will also be associated with the
* provided firstJobId. If a stage for the shuffleId existed previously so that the shuffleId is
* present in the MapOutputTracker, then the number and location of available outputs are
* recovered from the MapOutputTracker
*/
private def newOrUsedShuffleStage(
shuffleDep: ShuffleDependency[_, _, _],
firstJobId: Int): ShuffleMapStage = {
val rdd = shuffleDep.rdd
val numTasks = rdd.partitions.length
val stage = newShuffleMapStage(rdd, numTasks, shuffleDep, firstJobId, rdd.creationSite)
if (mapOutputTracker.containsShuffle(shuffleDep.shuffleId)) {
val serLocs = mapOutputTracker.getSerializedMapOutputStatuses(shuffleDep.shuffleId)
val locs = MapOutputTracker.deserializeMapStatuses(serLocs)
(0 until locs.length).foreach { i =>
if (locs(i) ne null) {
// locs(i) will be null if missing
stage.addOutputLoc(i, locs(i))
}
}
} else {
// Kind of ugly: need to register RDDs with the cache and map output tracker here
// since we can't do it in the RDD constructor because # of partitions is unknown
logInfo("Registering RDD " + rdd.id + " (" + rdd.getCreationSite + ")")
mapOutputTracker.registerShuffle(shuffleDep.shuffleId, rdd.partitions.length)
}
stage
}
/**
* Get or create the list of parent stages for a given RDD. The new Stages will be created with
* the provided firstJobId.
*/
private def getParentStages(rdd: RDD[_], firstJobId: Int): List[Stage] = {
val parents = new HashSet[Stage]
val visited = new HashSet[RDD[_]]
// We are manually maintaining a stack here to prevent StackOverflowError
// caused by recursively visiting
val waitingForVisit = new Stack[RDD[_]]
def visit(r: RDD[_]) {
if (!visited(r)) {
visited += r
// Kind of ugly: need to register RDDs with the cache here since
// we can't do it in its constructor because # of partitions is unknown
for (dep <- r.dependencies) {
dep match {
case shufDep: ShuffleDependency[_, _, _] =>
parents += getShuffleMapStage(shufDep, firstJobId)
case _ =>
waitingForVisit.push(dep.rdd)
}
}
}
}
waitingForVisit.push(rdd)
while (waitingForVisit.nonEmpty) {
visit(waitingForVisit.pop())
}
parents.toList
}
/** Find ancestor shuffle dependencies that are not registered in shuffleToMapStage yet */
private def getAncestorShuffleDependencies(rdd: RDD[_]): Stack[ShuffleDependency[_, _, _]] = {
val parents = new Stack[ShuffleDependency[_, _, _]]
val visited = new HashSet[RDD[_]]
// We are manually maintaining a stack here to prevent StackOverflowError
// caused by recursively visiting
val waitingForVisit = new Stack[RDD[_]]
def visit(r: RDD[_]) {
if (!visited(r)) {
visited += r
for (dep <- r.dependencies) {
dep match {
case shufDep: ShuffleDependency[_, _, _] =>
if (!shuffleToMapStage.contains(shufDep.shuffleId)) {
parents.push(shufDep)
}
case _ =>
}
waitingForVisit.push(dep.rdd)
}
}
}
waitingForVisit.push(rdd)
while (waitingForVisit.nonEmpty) {
visit(waitingForVisit.pop())
}
parents
}
private def getMissingParentStages(stage: Stage): List[Stage] = {
val missing = new HashSet[Stage]
val visited = new HashSet[RDD[_]]
// We are manually maintaining a stack here to prevent StackOverflowError
// caused by recursively visiting
val waitingForVisit = new Stack[RDD[_]]
def visit(rdd: RDD[_]) {
if (!visited(rdd)) {
visited += rdd
val rddHasUncachedPartitions = getCacheLocs(rdd).contains(Nil)
if (rddHasUncachedPartitions) {
for (dep <- rdd.dependencies) {
dep match {
case shufDep: ShuffleDependency[_, _, _] =>
val mapStage = getShuffleMapStage(shufDep, stage.firstJobId)
if (!mapStage.isAvailable) {
missing += mapStage
}
case narrowDep: NarrowDependency[_] =>
waitingForVisit.push(narrowDep.rdd)
}
}
}
}
}
waitingForVisit.push(stage.rdd)
while (waitingForVisit.nonEmpty) {
visit(waitingForVisit.pop())
}
missing.toList
}
/**
* Registers the given jobId among the jobs that need the given stage and
* all of that stage's ancestors.
*/
private def updateJobIdStageIdMaps(jobId: Int, stage: Stage): Unit = {
def updateJobIdStageIdMapsList(stages: List[Stage]) {
if (stages.nonEmpty) {
val s = stages.head
s.jobIds += jobId
jobIdToStageIds.getOrElseUpdate(jobId, new HashSet[Int]()) += s.id
val parents: List[Stage] = getParentStages(s.rdd, jobId)
val parentsWithoutThisJobId = parents.filter { ! _.jobIds.contains(jobId) }
updateJobIdStageIdMapsList(parentsWithoutThisJobId ++ stages.tail)
}
}
updateJobIdStageIdMapsList(List(stage))
}
/**
* Removes state for job and any stages that are not needed by any other job. Does not
* handle cancelling tasks or notifying the SparkListener about finished jobs/stages/tasks.
*
* @param job The job whose state to cleanup.
*/
private def cleanupStateForJobAndIndependentStages(job: ActiveJob): Unit = {
val registeredStages = jobIdToStageIds.get(job.jobId)
if (registeredStages.isEmpty || registeredStages.get.isEmpty) {
logError("No stages registered for job " + job.jobId)
} else {
stageIdToStage.filterKeys(stageId => registeredStages.get.contains(stageId)).foreach {
case (stageId, stage) =>
val jobSet = stage.jobIds
if (!jobSet.contains(job.jobId)) {
logError(
"Job %d not registered for stage %d even though that stage was registered for the job"
.format(job.jobId, stageId))
} else {
def removeStage(stageId: Int) {
// data structures based on Stage
for (stage <- stageIdToStage.get(stageId)) {
if (runningStages.contains(stage)) {
logDebug("Removing running stage %d".format(stageId))
runningStages -= stage
}
for ((k, v) <- shuffleToMapStage.find(_._2 == stage)) {
shuffleToMapStage.remove(k)
}
if (waitingStages.contains(stage)) {
logDebug("Removing stage %d from waiting set.".format(stageId))
waitingStages -= stage
}
if (failedStages.contains(stage)) {
logDebug("Removing stage %d from failed set.".format(stageId))
failedStages -= stage
}
}
// data structures based on StageId
stageIdToStage -= stageId
logDebug("After removal of stage %d, remaining stages = %d"
.format(stageId, stageIdToStage.size))
}
jobSet -= job.jobId
if (jobSet.isEmpty) { // no other job needs this stage
removeStage(stageId)
}
}
}
}
jobIdToStageIds -= job.jobId
jobIdToActiveJob -= job.jobId
activeJobs -= job
job.finalStage match {
case r: ResultStage => r.removeActiveJob()
case m: ShuffleMapStage => m.removeActiveJob(job)
}
}
/**
* Submit an action job to the scheduler.
*
* @param rdd target RDD to run tasks on
* @param func a function to run on each partition of the RDD
* @param partitions set of partitions to run on; some jobs may not want to compute on all
* partitions of the target RDD, e.g. for operations like first()
* @param callSite where in the user program this job was called
* @param resultHandler callback to pass each result to
* @param properties scheduler properties to attach to this job, e.g. fair scheduler pool name
*
* @return a JobWaiter object that can be used to block until the job finishes executing
* or can be used to cancel the job.
*
* @throws IllegalArgumentException when partitions ids are illegal
*/
def submitJob[T, U](
rdd: RDD[T],
func: (TaskContext, Iterator[T]) => U,
partitions: Seq[Int],
callSite: CallSite,
resultHandler: (Int, U) => Unit,
properties: Properties): JobWaiter[U] = {
// Check to make sure we are not launching a task on a partition that does not exist.
val maxPartitions = rdd.partitions.length
partitions.find(p => p >= maxPartitions || p < 0).foreach { p =>
throw new IllegalArgumentException(
"Attempting to access a non-existent partition: " + p + ". " +
"Total number of partitions: " + maxPartitions)
}
val jobId = nextJobId.getAndIncrement()
if (partitions.size == 0) {
// Return immediately if the job is running 0 tasks
return new JobWaiter[U](this, jobId, 0, resultHandler)
}
assert(partitions.size > 0)
val func2 = func.asInstanceOf[(TaskContext, Iterator[_]) => _]
val waiter = new JobWaiter(this, jobId, partitions.size, resultHandler)
eventProcessLoop.post(JobSubmitted(
jobId, rdd, func2, partitions.toArray, callSite, waiter,
SerializationUtils.clone(properties)))
waiter
}
/**
* Run an action job on the given RDD and pass all the results to the resultHandler function as
* they arrive.
*
* @param rdd target RDD to run tasks on
* @param func a function to run on each partition of the RDD
* @param partitions set of partitions to run on; some jobs may not want to compute on all
* partitions of the target RDD, e.g. for operations like first()
* @param callSite where in the user program this job was called
* @param resultHandler callback to pass each result to
* @param properties scheduler properties to attach to this job, e.g. fair scheduler pool name
*
* @throws Exception when the job fails
*/
def runJob[T, U](
rdd: RDD[T],
func: (TaskContext, Iterator[T]) => U,
partitions: Seq[Int],
callSite: CallSite,
resultHandler: (Int, U) => Unit,
properties: Properties): Unit = {
val start = System.nanoTime
val waiter = submitJob(rdd, func, partitions, callSite, resultHandler, properties)
Await.ready(waiter.completionFuture, atMost = Duration.Inf)
waiter.completionFuture.value.get match {
case scala.util.Success(_) =>
logInfo("Job %d finished: %s, took %f s".format
(waiter.jobId, callSite.shortForm, (System.nanoTime - start) / 1e9))
case scala.util.Failure(exception) =>
logInfo("Job %d failed: %s, took %f s".format
(waiter.jobId, callSite.shortForm, (System.nanoTime - start) / 1e9))
// SPARK-8644: Include user stack trace in exceptions coming from DAGScheduler.
val callerStackTrace = Thread.currentThread().getStackTrace.tail
exception.setStackTrace(exception.getStackTrace ++ callerStackTrace)
throw exception
}
}
/**
* Run an approximate job on the given RDD and pass all the results to an ApproximateEvaluator
* as they arrive. Returns a partial result object from the evaluator.
*
* @param rdd target RDD to run tasks on
* @param func a function to run on each partition of the RDD
* @param evaluator [[ApproximateEvaluator]] to receive the partial results
* @param callSite where in the user program this job was called
* @param timeout maximum time to wait for the job, in milliseconds
* @param properties scheduler properties to attach to this job, e.g. fair scheduler pool name
*/
def runApproximateJob[T, U, R](
rdd: RDD[T],
func: (TaskContext, Iterator[T]) => U,
evaluator: ApproximateEvaluator[U, R],
callSite: CallSite,
timeout: Long,
properties: Properties): PartialResult[R] = {
val listener = new ApproximateActionListener(rdd, func, evaluator, timeout)
val func2 = func.asInstanceOf[(TaskContext, Iterator[_]) => _]
val partitions = (0 until rdd.partitions.length).toArray
val jobId = nextJobId.getAndIncrement()
eventProcessLoop.post(JobSubmitted(
jobId, rdd, func2, partitions, callSite, listener, SerializationUtils.clone(properties)))
listener.awaitResult() // Will throw an exception if the job fails
}
/**
* Submit a shuffle map stage to run independently and get a JobWaiter object back. The waiter
* can be used to block until the the job finishes executing or can be used to cancel the job.
* This method is used for adaptive query planning, to run map stages and look at statistics
* about their outputs before submitting downstream stages.
*
* @param dependency the ShuffleDependency to run a map stage for
* @param callback function called with the result of the job, which in this case will be a
* single MapOutputStatistics object showing how much data was produced for each partition
* @param callSite where in the user program this job was submitted
* @param properties scheduler properties to attach to this job, e.g. fair scheduler pool name
*/
def submitMapStage[K, V, C](
dependency: ShuffleDependency[K, V, C],
callback: MapOutputStatistics => Unit,
callSite: CallSite,
properties: Properties): JobWaiter[MapOutputStatistics] = {
val rdd = dependency.rdd
val jobId = nextJobId.getAndIncrement()
if (rdd.partitions.length == 0) {
throw new SparkException("Can't run submitMapStage on RDD with 0 partitions")
}
// We create a JobWaiter with only one "task", which will be marked as complete when the whole
// map stage has completed, and will be passed the MapOutputStatistics for that stage.
// This makes it easier to avoid race conditions between the user code and the map output
// tracker that might result if we told the user the stage had finished, but then they queries
// the map output tracker and some node failures had caused the output statistics to be lost.
val waiter = new JobWaiter(this, jobId, 1, (i: Int, r: MapOutputStatistics) => callback(r))
eventProcessLoop.post(MapStageSubmitted(
jobId, dependency, callSite, waiter, SerializationUtils.clone(properties)))
waiter
}
/**
* Cancel a job that is running or waiting in the queue.
*/
def cancelJob(jobId: Int): Unit = {
logInfo("Asked to cancel job " + jobId)
eventProcessLoop.post(JobCancelled(jobId))
}
/**
* Cancel all jobs in the given job group ID.
*/
def cancelJobGroup(groupId: String): Unit = {
logInfo("Asked to cancel job group " + groupId)
eventProcessLoop.post(JobGroupCancelled(groupId))
}
/**
* Cancel all jobs that are running or waiting in the queue.
*/
def cancelAllJobs(): Unit = {
eventProcessLoop.post(AllJobsCancelled)
}
private[scheduler] def doCancelAllJobs() {
// Cancel all running jobs.
runningStages.map(_.firstJobId).foreach(handleJobCancellation(_,
reason = "as part of cancellation of all jobs"))
activeJobs.clear() // These should already be empty by this point,
jobIdToActiveJob.clear() // but just in case we lost track of some jobs...
submitWaitingStages()
}
/**
* Cancel all jobs associated with a running or scheduled stage.
*/
def cancelStage(stageId: Int) {
eventProcessLoop.post(StageCancelled(stageId))
}
/**
* Resubmit any failed stages. Ordinarily called after a small amount of time has passed since
* the last fetch failure.
*/
private[scheduler] def resubmitFailedStages() {
if (failedStages.size > 0) {
// Failed stages may be removed by job cancellation, so failed might be empty even if
// the ResubmitFailedStages event has been scheduled.
logInfo("Resubmitting failed stages")
clearCacheLocs()
val failedStagesCopy = failedStages.toArray
failedStages.clear()
for (stage <- failedStagesCopy.sortBy(_.firstJobId)) {
submitStage(stage)
}
}
submitWaitingStages()
}
/**
* Check for waiting stages which are now eligible for resubmission.
* Ordinarily run on every iteration of the event loop.
*/
private def submitWaitingStages() {
// TODO: We might want to run this less often, when we are sure that something has become
// runnable that wasn't before.
logTrace("Checking for newly runnable parent stages")
logTrace("running: " + runningStages)
logTrace("waiting: " + waitingStages)
logTrace("failed: " + failedStages)
val waitingStagesCopy = waitingStages.toArray
waitingStages.clear()
for (stage <- waitingStagesCopy.sortBy(_.firstJobId)) {
submitStage(stage)
}
}
/** Finds the earliest-created active job that needs the stage */
// TODO: Probably should actually find among the active jobs that need this
// stage the one with the highest priority (highest-priority pool, earliest created).
// That should take care of at least part of the priority inversion problem with
// cross-job dependencies.
private def activeJobForStage(stage: Stage): Option[Int] = {
val jobsThatUseStage: Array[Int] = stage.jobIds.toArray.sorted
jobsThatUseStage.find(jobIdToActiveJob.contains)
}
private[scheduler] def handleJobGroupCancelled(groupId: String) {
// Cancel all jobs belonging to this job group.
// First finds all active jobs with this group id, and then kill stages for them.
val activeInGroup = activeJobs.filter { activeJob =>
Option(activeJob.properties).exists {
_.getProperty(SparkContext.SPARK_JOB_GROUP_ID) == groupId
}
}
val jobIds = activeInGroup.map(_.jobId)
jobIds.foreach(handleJobCancellation(_, "part of cancelled job group %s".format(groupId)))
submitWaitingStages()
}
private[scheduler] def handleBeginEvent(task: Task[_], taskInfo: TaskInfo) {
// Note that there is a chance that this task is launched after the stage is cancelled.
// In that case, we wouldn't have the stage anymore in stageIdToStage.
val stageAttemptId = stageIdToStage.get(task.stageId).map(_.latestInfo.attemptId).getOrElse(-1)
listenerBus.post(SparkListenerTaskStart(task.stageId, stageAttemptId, taskInfo))
submitWaitingStages()
}
private[scheduler] def handleTaskSetFailed(
taskSet: TaskSet,
reason: String,
exception: Option[Throwable]): Unit = {
stageIdToStage.get(taskSet.stageId).foreach { abortStage(_, reason, exception) }
submitWaitingStages()
}
private[scheduler] def cleanUpAfterSchedulerStop() {
for (job <- activeJobs) {
val error =
new SparkException(s"Job ${job.jobId} cancelled because SparkContext was shut down")
job.listener.jobFailed(error)
// Tell the listeners that all of the running stages have ended. Don't bother
// cancelling the stages because if the DAG scheduler is stopped, the entire application
// is in the process of getting stopped.
val stageFailedMessage = "Stage cancelled because SparkContext was shut down"
// The `toArray` here is necessary so that we don't iterate over `runningStages` while
// mutating it.
runningStages.toArray.foreach { stage =>
markStageAsFinished(stage, Some(stageFailedMessage))
}
listenerBus.post(SparkListenerJobEnd(job.jobId, clock.getTimeMillis(), JobFailed(error)))
}
}
private[scheduler] def handleGetTaskResult(taskInfo: TaskInfo) {
listenerBus.post(SparkListenerTaskGettingResult(taskInfo))
submitWaitingStages()
}
private[scheduler] def handleJobSubmitted(jobId: Int,
finalRDD: RDD[_],
func: (TaskContext, Iterator[_]) => _,
partitions: Array[Int],
callSite: CallSite,
listener: JobListener,
properties: Properties) {
var finalStage: ResultStage = null
try {
// New stage creation may throw an exception if, for example, jobs are run on a
// HadoopRDD whose underlying HDFS files have been deleted.
finalStage = newResultStage(finalRDD, func, partitions, jobId, callSite)
} catch {
case e: Exception =>
logWarning("Creating new stage failed due to exception - job: " + jobId, e)
listener.jobFailed(e)
return
}
val job = new ActiveJob(jobId, finalStage, callSite, listener, properties)
clearCacheLocs()
logInfo("Got job %s (%s) with %d output partitions".format(
job.jobId, callSite.shortForm, partitions.length))
logInfo("Final stage: " + finalStage + " (" + finalStage.name + ")")
logInfo("Parents of final stage: " + finalStage.parents)
logInfo("Missing parents: " + getMissingParentStages(finalStage))
val jobSubmissionTime = clock.getTimeMillis()
jobIdToActiveJob(jobId) = job
activeJobs += job
finalStage.setActiveJob(job)
val stageIds = jobIdToStageIds(jobId).toArray
val stageInfos = stageIds.flatMap(id => stageIdToStage.get(id).map(_.latestInfo))
listenerBus.post(
SparkListenerJobStart(job.jobId, jobSubmissionTime, stageInfos, properties))
submitStage(finalStage)
submitWaitingStages()
}
private[scheduler] def handleMapStageSubmitted(jobId: Int,
dependency: ShuffleDependency[_, _, _],
callSite: CallSite,
listener: JobListener,
properties: Properties) {
// Submitting this map stage might still require the creation of some parent stages, so make
// sure that happens.
var finalStage: ShuffleMapStage = null
try {
// New stage creation may throw an exception if, for example, jobs are run on a
// HadoopRDD whose underlying HDFS files have been deleted.
finalStage = getShuffleMapStage(dependency, jobId)
} catch {
case e: Exception =>
logWarning("Creating new stage failed due to exception - job: " + jobId, e)
listener.jobFailed(e)
return
}
val job = new ActiveJob(jobId, finalStage, callSite, listener, properties)
clearCacheLocs()
logInfo("Got map stage job %s (%s) with %d output partitions".format(
jobId, callSite.shortForm, dependency.rdd.partitions.length))
logInfo("Final stage: " + finalStage + " (" + finalStage.name + ")")
logInfo("Parents of final stage: " + finalStage.parents)
logInfo("Missing parents: " + getMissingParentStages(finalStage))
val jobSubmissionTime = clock.getTimeMillis()
jobIdToActiveJob(jobId) = job
activeJobs += job
finalStage.addActiveJob(job)
val stageIds = jobIdToStageIds(jobId).toArray
val stageInfos = stageIds.flatMap(id => stageIdToStage.get(id).map(_.latestInfo))
listenerBus.post(
SparkListenerJobStart(job.jobId, jobSubmissionTime, stageInfos, properties))
submitStage(finalStage)
// If the whole stage has already finished, tell the listener and remove it
if (finalStage.isAvailable) {
markMapStageJobAsFinished(job, mapOutputTracker.getStatistics(dependency))
}
submitWaitingStages()
}
/** Submits stage, but first recursively submits any missing parents. */
private def submitStage(stage: Stage) {
val jobId = activeJobForStage(stage)
if (jobId.isDefined) {
logDebug("submitStage(" + stage + ")")
if (!waitingStages(stage) && !runningStages(stage) && !failedStages(stage)) {
val missing = getMissingParentStages(stage).sortBy(_.id)
logDebug("missing: " + missing)
if (missing.isEmpty) {
logInfo("Submitting " + stage + " (" + stage.rdd + "), which has no missing parents")
submitMissingTasks(stage, jobId.get)
} else {
for (parent <- missing) {
submitStage(parent)
}
waitingStages += stage
}
}
} else {
abortStage(stage, "No active job for stage " + stage.id, None)
}
}
/** Called when stage's parents are available and we can now do its task. */
private def submitMissingTasks(stage: Stage, jobId: Int) {
logDebug("submitMissingTasks(" + stage + ")")
// Get our pending tasks and remember them in our pendingTasks entry
stage.pendingPartitions.clear()
// First figure out the indexes of partition ids to compute.
val partitionsToCompute: Seq[Int] = stage.findMissingPartitions()
// Create internal accumulators if the stage has no accumulators initialized.
// Reset internal accumulators only if this stage is not partially submitted
// Otherwise, we may override existing accumulator values from some tasks
if (stage.internalAccumulators.isEmpty || stage.numPartitions == partitionsToCompute.size) {
stage.resetInternalAccumulators()
}
// Use the scheduling pool, job group, description, etc. from an ActiveJob associated
// with this Stage
val properties = jobIdToActiveJob(jobId).properties
runningStages += stage
// SparkListenerStageSubmitted should be posted before testing whether tasks are
// serializable. If tasks are not serializable, a SparkListenerStageCompleted event
// will be posted, which should always come after a corresponding SparkListenerStageSubmitted
// event.
stage match {
case s: ShuffleMapStage =>
outputCommitCoordinator.stageStart(stage = s.id, maxPartitionId = s.numPartitions - 1)
case s: ResultStage =>
outputCommitCoordinator.stageStart(
stage = s.id, maxPartitionId = s.rdd.partitions.length - 1)
}
val taskIdToLocations: Map[Int, Seq[TaskLocation]] = try {
stage match {
case s: ShuffleMapStage =>
partitionsToCompute.map { id => (id, getPreferredLocs(stage.rdd, id))}.toMap
case s: ResultStage =>
val job = s.activeJob.get
partitionsToCompute.map { id =>
val p = s.partitions(id)
(id, getPreferredLocs(stage.rdd, p))
}.toMap
}
} catch {
case NonFatal(e) =>
stage.makeNewStageAttempt(partitionsToCompute.size)
listenerBus.post(SparkListenerStageSubmitted(stage.latestInfo, properties))
abortStage(stage, s"Task creation failed: $e\n${e.getStackTraceString}", Some(e))
runningStages -= stage
return
}
stage.makeNewStageAttempt(partitionsToCompute.size, taskIdToLocations.values.toSeq)
listenerBus.post(SparkListenerStageSubmitted(stage.latestInfo, properties))
// TODO: Maybe we can keep the taskBinary in Stage to avoid serializing it multiple times.
// Broadcasted binary for the task, used to dispatch tasks to executors. Note that we broadcast
// the serialized copy of the RDD and for each task we will deserialize it, which means each
// task gets a different copy of the RDD. This provides stronger isolation between tasks that
// might modify state of objects referenced in their closures. This is necessary in Hadoop
// where the JobConf/Configuration object is not thread-safe.
var taskBinary: Broadcast[Array[Byte]] = null
try {
// For ShuffleMapTask, serialize and broadcast (rdd, shuffleDep).