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unable to install rseqR #3

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dimurali93 opened this issue Apr 8, 2021 · 0 comments
Open

unable to install rseqR #3

dimurali93 opened this issue Apr 8, 2021 · 0 comments

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@dimurali93
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remotes::install_github("anilchalisey/rseqR")
Downloading GitHub repo anilchalisey/rseqR@HEAD
✓ checking for file ‘/private/var/folders/sg/6854jvkj0sj0_mjc_q9dw2pr0000gn/T/RtmpJP9kTN/remotesc4ef60b1fdce/anilchalisey-rseqR-6bec4ec/DESCRIPTION’ (470ms)
─ preparing ‘rseqR’:
✓ checking DESCRIPTION meta-information ...
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ building ‘rseqR_0.0.1.1.tar.gz’

Installing package into ‘/Users/divya/Downloads’
(as ‘lib’ is unspecified)

  • installing source package ‘rseqR’ ...
    ** using staged installation
    ** R
    Error in parse(outFile) :
    /private/var/folders/sg/6854jvkj0sj0_mjc_q9dw2pr0000gn/T/Rtmpi6PF53/R.INSTALLc6fd66ae3814/rseqR/R/pathway_analysis.R:76:12: unexpected '{'
    75: # if plotting then do so here - we plot the top 3 upregulated and downregulated
    76: if (plot {
    ^
    ERROR: unable to collate and parse R files for package ‘rseqR’
  • removing ‘/Users/divya/Downloads/rseqR’
    Warning message:
    In i.p(...) :
    installation of package ‘/var/folders/sg/6854jvkj0sj0_mjc_q9dw2pr0000gn/T//RtmpJP9kTN/filec4ef458e10fa/rseqR_0.0.1.1.tar.gz’ had non-zero exit status
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