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ANTs apply transform for template construction has hardcoded dimension = 3 #1718

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mabulnaga opened this issue Apr 11, 2024 · 2 comments · Fixed by #1719
Closed

ANTs apply transform for template construction has hardcoded dimension = 3 #1718

mabulnaga opened this issue Apr 11, 2024 · 2 comments · Fixed by #1719

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@mabulnaga
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in the files antsMultivariateTemplateConstruction.sh and antsMultivariateTemplateConstruction2.sh, the calls to antsAI and antsApplyTransforms have hardcoded -d 3, when they should instead be -d ${DIM}. This was causing errors when trying to construct 2D templates.
@cookpa
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cookpa commented Apr 11, 2024

Oops, my mistake. Workaround with an initial template (-z), I will fix

@mabulnaga
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I just sent in a PR

@cookpa cookpa mentioned this issue Apr 11, 2024
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@cookpa cookpa linked a pull request Apr 11, 2024 that will close this issue
Fix hardcoded dimension in template construction #1719
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@cookpa @mabulnaga